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Slc23a3 Gene Detail
Summary
  • Symbol
    Slc23a3
  • Name
    solute carrier family 23 (nucleobase transporters), member 3
  • Synonyms
    SVCT3, Yspl1
  • Feature Type
    protein coding gene
  • IDs
    MGI:104516
    NCBI Gene: 22626
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:75125541-75133890 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 38.60 cM, cytoband C3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    21 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_104516
protein coding gene Chr1:75125541-75135223 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016170
protein coding gene Chr1:75684125-75692474 (-)
A/J MGP_AJ_G0016153
protein coding gene Chr1:73046342-73054696 (-)
AKR/J MGP_AKRJ_G0016110
protein coding gene Chr1:75074819-75083172 (-)
BALB/cJ MGP_BALBcJ_G0016108
protein coding gene Chr1:73109559-73117908 (-)
C3H/HeJ MGP_C3HHeJ_G0015939
protein coding gene Chr1:75406141-75414495 (-)
C57BL/6NJ MGP_C57BL6NJ_G0016561
protein coding gene Chr1:78638332-78646681 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014282
protein coding gene Chr1:68608632-68617518 (-)
CAST/EiJ MGP_CASTEiJ_G0015523
protein coding gene Chr1:74740860-74751143 (-)
CBA/J MGP_CBAJ_G0015912
protein coding gene Chr1:81191871-81200225 (-)
DBA/2J MGP_DBA2J_G0016013
protein coding gene Chr1:72366212-72374561 (-)
FVB/NJ MGP_FVBNJ_G0016016
protein coding gene Chr1:71562608-71570990 (-)
LP/J MGP_LPJ_G0016085
protein coding gene Chr1:76810289-76818638 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016036
protein coding gene Chr1:84552997-84561351 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0016608
protein coding gene Chr1:75143209-75151558 (-)
PWK/PhJ MGP_PWKPhJ_G0015310
protein coding gene Chr1:71833883-71842550 (-)
SPRET/EiJ MGP_SPRETEiJ_G0015088
protein coding gene Chr1:74505734-74514160 (-)
WSB/EiJ MGP_WSBEiJ_G0015585
protein coding gene Chr1:74956630-74964982 (-)



Homology
more
  • Human Ortholog
    SLC23A3, solute carrier family 23 member 3
  • Vertebrate Orthologs
    10
  • Human Ortholog
    SLC23A3, solute carrier family 23 member 3
    Orthology source: HGNC, HomoloGene
  • Synonyms
    E2BP3, SVCT3, Yspl1
  • Links
    NCBI Gene ID: 151295
    neXtProt AC: NX_Q6PIS1
    UniProt: Q6PIS1

  • Chr Location
    2q35; chr2:219161459-219170095 (-)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    19 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000026205 Ensembl Gene Model | MGI Sequence Detail 8350 C57BL/6J ±  kb
transcript ENSMUST00000027405 Ensembl | MGI Sequence Detail 2059 Not Applicable  
polypeptide ENSMUSP00000027405 Ensembl | MGI Sequence Detail 611 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    2 Sequences
  • InterPro Domains
    IPR029957 Solute carrier family 23 member 3
    IPR006043 Xanthine/uracil/vitamin C permease
Molecular
Reagents
less
  • All nucleic 20
    Genomic 1
    cDNA 17
    Primer pair 2

    Microarray probesets 5
Other
Accession IDs
less
MGD-MRK-25947
References
more
  • Summaries
    All 42
    Developmental Gene Expression 3
    Diseases 1
    Gene Ontology 2
    Phenotypes 19
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory