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Cd6 Gene Detail
Summary
  • Symbol
    Cd6
  • Name
    CD6 antigen
  • Feature Type
    protein coding gene
  • IDs
    MGI:103566
    NCBI Gene: 12511
  • Gene Overview
    MyGene.info: CD6
Location & Maps
more
  • Sequence Map
    Chr19:10789341-10830058 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      40718 bp   ±  kb flank

  • Genome Browsers
Homology
more
  • Human Ortholog
    CD6, CD6 molecule
  • Vertebrate Orthologs
    7
  • Human Ortholog
    CD6, CD6 molecule
    Orthology source: HGNC, HomoloGene
  • Synonyms
    TP120
  • Links
    NCBI Gene ID: 923
    neXtProt AC: NX_P30203

  • Chr Location
    11q13; chr11:60971641-61020377 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    3
  • Gene trapped
    1
  • Targeted
    2
  • Incidental Mutations
    APF
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000036965 VEGA Gene Model | MGI Sequence Detail 40718 C57BL/6J ±  kb
transcript OTTMUST00000095000 VEGA | MGI Sequence Detail 3032 Not Applicable  
polypeptide OTTMUSP00000052978 VEGA | MGI Sequence Detail 665 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    218 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 24
    Genomic 3
    cDNA 21

    Microarray probesets 5
Other
Accession IDs
less
MGD-MRK-24451
References
more
  • Summaries
    All 31
    Gene Ontology 5
    Phenotypes 4
  • Earliest
    J:20989 Wee S, et al., Characterization of a CD6 ligand(s) expressed on human- and murine-derived cell lines and murine lymphoid tissues. Cell Immunol. 1994 Oct 15;158(2):353-64
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
05/17/2016
MGI 6.03
The Jackson Laboratory