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Calm3 Gene Detail
Summary
  • Symbol
    Calm3
  • Name
    calmodulin 3
  • Feature Type
    protein coding gene
  • IDs
    MGI:103249
    NCBI Gene: 12315
  • Gene Overview
    MyGene.info: CALM3
  • Alliance
  • Transcription Start Sites
    18 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:16915379-16924032 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 9.15 cM
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    61 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_103249
protein coding gene Chr7:16915379-16924114 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031723
protein coding gene Chr7:14682452-14692110 (-)
A/J MGP_AJ_G0031695
protein coding gene Chr7:14396569-14405301 (-)
AKR/J MGP_AKRJ_G0031620
protein coding gene Chr7:14738057-14746815 (-)
BALB/cJ MGP_BALBcJ_G0031702
protein coding gene Chr7:14504479-14513227 (-)
C3H/HeJ MGP_C3HHeJ_G0031424
protein coding gene Chr7:14922406-14931068 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032168
protein coding gene Chr7:15411143-15419751 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029247
protein coding gene Chr7:15933344-15942000 (-)
CAST/EiJ MGP_CASTEiJ_G0030775
protein coding gene Chr7:11700765-11710171 (-)
CBA/J MGP_CBAJ_G0031383
protein coding gene Chr7:15927926-15943246 (-)
DBA/2J MGP_DBA2J_G0031539
protein coding gene Chr7:14288463-14297861 (-)
FVB/NJ MGP_FVBNJ_G0031495
protein coding gene Chr7:14188882-14198133 (-)
LP/J MGP_LPJ_G0031624
protein coding gene Chr7:14917733-14926455 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031530
protein coding gene Chr7:15847676-15858323 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032197
protein coding gene Chr7:14516088-14525543 (-)
PWK/PhJ MGP_PWKPhJ_G0030499
protein coding gene Chr7:11808585-11817811 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030326
protein coding gene Chr7:9438734-9447386 (-)
WSB/EiJ MGP_WSBEiJ_G0030872
protein coding gene Chr7:14582916-14591703 (-)



Homology
more
  • Human Ortholog
    CALM3, calmodulin 3
  • Vertebrate Orthologs
    23
  • Human Ortholog
    CALM3, calmodulin 3
    Orthology source: HGNC
  • Synonyms
    CALM, CaM, CAM1, CAM2, CAMB, CaMIII, HEL-S-72, PHKD, PHKD3
  • Links
    NCBI Gene ID: 808
    neXtProt AC: NX_P0DP23, NX_P0DP24, NX_P0DP25
    UniProt: P0DP25

  • Chr Location
    19q13.32; chr19:46601255-46610782 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 12315 NCBI Gene Model | MGI Sequence Detail 8654 C57BL/6J ±  kb
transcript NM_007590 RefSeq | MGI Sequence Detail 2233 C57BL/6  
polypeptide NP_031616 RefSeq | MGI Sequence Detail 149 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 294
    Genomic 1
    cDNA 291
    Primer pair 1
    Other 1

    Microarray probesets 4
Other
Accession IDs
less
MGD-MRK-24125, MGI:2142387
References
more
  • Summaries
    All 39
    Developmental Gene Expression 6
    Gene Ontology 4
    Phenotypes 6
  • Earliest
    J:19936 Bender PK, et al., The abundance of calmodulin mRNAs is regulated in phosphorylase kinase-deficient skeletal muscle. J Biol Chem. 1988 Jul 15;263(20):9733-7
  • Latest
    J:192932 Nakada T, et al., The proximal C-terminus of alpha(1C) subunits is necessary for junctional membrane targeting of cardiac L-type calcium channels. Biochem J. 2012 Dec 1;448(2):221-31

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory