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Rn7sk Gene Detail
Summary
  • Symbol
    Rn7sk
  • Name
    RNA, 7SK, nuclear
  • Feature Type
    snRNA gene
  • IDs
    MGI:103186
    NCBI Gene: 19817
  • Gene Overview
    MyGene.info: RN7SK
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr9:78175303-78175633 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 43.63 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    39 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_103186
snRNA gene Chr9:78175302-78175633 (-)
129S1/SvImJ MGP_129S1SvImJ_G0009876
unclassified non-coding RNA gene Chr9:78646265-78646595 (-)
A/J MGP_AJ_G0009862
unclassified non-coding RNA gene Chr9:75901899-75902841 (-)
AKR/J MGP_AKRJ_G0009845
unclassified non-coding RNA gene Chr9:77707524-77707854 (-)
BALB/cJ MGP_BALBcJ_G0009846
unclassified non-coding RNA gene Chr9:75583364-75583694 (-)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0010090
unclassified non-coding RNA gene Chr9:80754045-80754375 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0009597
unclassified non-coding RNA gene Chr9:78571490-78571820 (-)
CBA/J MGP_CBAJ_G0009751
unclassified non-coding RNA gene Chr9:83525095-83525425 (-)
DBA/2J MGP_DBA2J_G0009780
unclassified non-coding RNA gene Chr9:75563388-75563718 (-)
FVB/NJ MGP_FVBNJ_G0009795
unclassified non-coding RNA gene Chr9:74809685-74810015 (-)
LP/J MGP_LPJ_G0009872
unclassified non-coding RNA gene Chr9:78873711-78874041 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0009763
unclassified non-coding RNA gene Chr9:84759471-84759801 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0010063
unclassified non-coding RNA gene Chr9:77883754-77884062 (-)
PWK/PhJ MGP_PWKPhJ_G0009520
unclassified non-coding RNA gene Chr9:75797820-75798150 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0009697
unclassified non-coding RNA gene Chr9:77811555-77811885 (-)



Homology
more
  • Human Ortholog
    RN7SK, RNA component of 7SK nuclear ribonucleoprotein
  • Human Ortholog
    RN7SK, RNA component of 7SK nuclear ribonucleoprotein
    Orthology source: HGNC
  • Synonyms
    7SK
  • Links
    NCBI Gene ID: 125050

  • Chr Location
    6p12.2; chr6:52995620-52995951 (+)  GRCh38.p7

  • HCOP
    human homology predictions: RN7SK
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000065037 Ensembl Gene Model | MGI Sequence Detail 331 C57BL/6J ±  kb
transcript ENSMUST00000083103 Ensembl | MGI Sequence Detail 331 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    Genomic 1
    cDNA 2
    Primer pair 1
Other
Accession IDs
less
MGD-MRK-24054
References
more
  • Summaries
    All 15
    Developmental Gene Expression 3
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:12013 Russell LB, Definition of functional units in a small chromosomal segment of the mouse and its use in interpreting the nature of radiation-induced mutations. Mutat Res. 1971 Jan;11(1):107-23
  • Latest
    J:257846 Bazi Z, et al., Rn7SK small nuclear RNA is involved in neuronal differentiation. J Cell Biochem. 2018 Apr;119(4):3174-3182

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
03/31/2020
MGI 6.15
The Jackson Laboratory