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Stx3
Gene Detail
 Symbol
Name
ID
Stx3
syntaxin 3
MGI:103077
Synonyms Syn-3, syntaxin 3A, syntaxin 3B
Feature Type protein coding gene
Genetic Map
Chromosome 19
8.52 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr19:11775119-11819403 bp, - strand
From Ensembl annotation of GRCm38

  44285 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:80191  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Protein SuperFamily: syntaxin
Gene Tree: Stx3

Human
homologs
Human Homolog STX3, syntaxin 3
NCBI Gene ID 6809
neXtProt AC  NX_Q13277
Human Synonyms  STX3A
Human Chr (Location)  11q12.1; chr11:59755006-59805882 (+)  GRCh38
Alleles
and
phenotypes
All alleles(9) : Targeted(1) Gene trapped(8)
Gene Ontology
(GO)
classifications
All GO classifications: (28 annotations)
Process exocytosis, intracellular protein transport, ...
Component apical plasma membrane, azurophil granule, ...
Function arachidonic acid binding, protein binding, ...
External Resources: FuncBase
Expression
Literature Summary: (8 records)
Data Summary: Results (42)    Tissues (33)    Images (18)
Theiler Stages: 19, 23, 24, 28
Assay TypeResults
RNA in situ 42
cDNA source data(23)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(25) cDNA(25)
Microarray probesets(11)
Other database
links
Ensembl Gene ModelENSMUSG00000041488 (Evidence)
Entrez Gene20908 (Evidence)
DFCITC1579230, TC1592377, TC1592990, TC1605600, TC1630740, TC1635715, TC1649844
NIA Mouse Gene IndexU038835
Consensus CDS ProjectCCDS29611.1, CCDS29612.1, CCDS29613.1
International Mouse Knockout Project StatusStx3
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000041488 Ensembl Gene Model | MGI Sequence Detail 44285 C57BL/6J ±  kb
transcript ENSMUST00000069285 Ensembl | MGI Sequence Detail 3269 Not Applicable 
polypeptide ENSMUSP00000069529 Ensembl | MGI Sequence Detail 289 Not Applicable 

For the selected sequences
All sequences(68) RefSeq(15) UniProt(5)
Polymorphisms SNPs within 2kb(392 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR006012 Syntaxin/epimorphin, conserved site
InterPro IPR006011 Syntaxin, N-terminal
InterPro IPR000727 Target SNARE coiled-coil domain
InterPro IPR010989 t-SNARE
Protein Ontology PR:000015795 syntaxin-3
References (Earliest) J:26509 Ibaraki K, et al., Identification of four different forms of syntaxin 3. Biochem Biophys Res Commun. 1995 Jun 26;211(3):997-1005
(Latest) J:200047 Yatsu A, et al., Syntaxin-3 is required for melanosomal localization of tyrp1 in melanocytes. J Invest Dermatol. 2013 Sep;133(9):2237-46
All references(45)
Other
accession IDs
MGD-MRK-23941, MGI:2147464, MGI:2147666, MGI:2147735

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory