Ryk-ps1 Pseudogene Detail

Summary

• Symbol
  Ryk-ps1
• Name
  receptor-like tyrosine kinase, pseudogene 1
• Synonyms
  Ryk-2, Rykl1

• Feature Type
  pseudogene
• IDs
  MGI:103028
  NCBI Gene: 111178
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:30536754-30536988 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  8 experiments

Strain
Comparison

• SNPs within 2kb
  69 from dbSNP Build 142
• Strain Annotations
  1
• RFLP
  2

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_103028	pseudogene	Chr12:30536732-30537911 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Ryk-ps1
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  5
• RefSeq
  1

• Ensembl
  ENSMUSG00000112665 (Evidence)
• NCBI Gene
  111178

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112665	Ensembl Gene Model | MGI Sequence Detail	235	C57BL/6J
transcript	ENSMUST00000219713	Ensembl | MGI Sequence Detail	235	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

Other
Accession IDs

MGD-MRK-23865

References

• Summaries
  All 6
• Earliest
  J:24374 Gough NM, et al., Localization of two mouse genes encoding the protein tyrosine kinase receptor-related protein RYK. Mamm Genome. 1995 Apr;6(4):255-6
• Latest
  J:53865 Halford MM, et al., Genomic structure and expression of the mouse growth factor receptor related to tyrosine kinases (Ryk). J Biol Chem. 1999 Mar 12;274(11):7379-90