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Lmo3 Gene Detail
Summary
  • Symbol
    Lmo3
  • Name
    LIM domain only 3
  • Synonyms
    Rbtn3, Rbtn-3
  • Feature Type
    protein coding gene
  • IDs
    MGI:102810
    NCBI Gene: 109593
Location & Maps
more
  • Sequence Map
    Chr6:138362918-138581968 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      219051 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 69.02 cM
  • Mapping Data
    4 experiments
Homology
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Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    1 phenotype from 2 alleles in 1 genetic background
    1 phenotype from multigenic genotypes
    3 phenotype references
Homozygous mutant mice show no overt phenotype.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000034595 VEGA Gene Model | MGI Sequence Detail 219051 C57BL/6J ±  kb
transcript OTTMUST00000087821 VEGA | MGI Sequence Detail 2425 Not Applicable  
polypeptide OTTMUSP00000047826 VEGA | MGI Sequence Detail 156 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    2486 from dbSNP Build 142
  • RFLP
Protein
Information
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  • UniProt
    6 Sequences
  • Protein Ontology
    PR:000032516 LIM domain only protein 3
  • InterPro Domains
    IPR001781 Zinc finger, LIM-type
Molecular
Reagents
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  • All nucleic 16
    Genomic 2
    cDNA 10
    Other 4

    Microarray probesets 3
Other
Accession IDs
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MGD-MRK-13798, MGD-MRK-13801, MGD-MRK-19718, MGI:2141511, MGI:2141726
References
more
  • Summaries
    All 59
    Developmental Gene Expression 35
    Gene Ontology 3
    Phenotypes 3
  • Earliest
    J:2046 Foroni L, et al., The rhombotin gene family encode related LIM-domain proteins whose differing expression suggests multiple roles in mouse development. J Mol Biol. 1992 Aug 5;226(3):747-61
  • Latest
    J:228726 Golonzhka O, et al., Pbx Regulates Patterning of the Cerebral Cortex in Progenitors and Postmitotic Neurons. Neuron. 2015 Dec 16;88(6):1192-207

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/23/2016
MGI 6.05
The Jackson Laboratory