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mt-Rnr1 Gene Detail
Summary
  • Symbol
    mt-Rnr1
  • Name
    mitochondrially encoded 12S rRNA
  • Synonyms
    12S ribosomal RNA, 12SrRNA, 12S rRNA, Rnr1 s-rRNA
  • Feature Type
    rRNA gene
  • IDs
    MGI:102493
    NCBI Gene: 17724
Location & Maps
more
  • Genetic Map
    Chromosome MT, Syntenic
Homology
more
  • Human Ortholog
    RNR1, s-rRNA
  • Human Ortholog
    RNR1, s-rRNA
    Orthology source: HGNC
  • Synonyms
    MTRNR1
  • Links
    NCBI Gene ID: 4549

  • Chr Location
    MT

  • HCOP
    human homology predictions: RNR1
  • Gene Tree
Human Diseases
more
  • Diseases
    1 with human RNR1 associations

Human Disease Mouse Models
       Deafness, Nonsyndromic Sensorineural, Mitochondrial   OMIM: 500008
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    2 phenotype references
  • All Mutations and Alleles
    14
  • Gene trapped
    14
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 17724 NCBI Gene Model | MGI Sequence Detail 955 C57BL/6J ±  kb
transcript AK142736 GenBank | EMBL | DDBJ | MGI Sequence Detail 889 C57BL/6J  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    16 from dbSNP Build 142
Molecular
Reagents
less
Other
Accession IDs
less
MGD-MRK-19330
References
more
  • Summaries
    All 22
    Developmental Gene Expression 2
    Gene Ontology 1
    Phenotypes 2
  • Earliest
    J:22484 Bibb MJ, et al., Sequence and gene organization of mouse mitochondrial DNA. Cell. 1981 Oct;26(2 Pt 2):167-80
  • Latest
    J:157314 Ling KH, et al., Molecular networks involved in mouse cerebral corticogenesis and spatio-temporal regulation of Sox4 and Sox11 novel antisense transcripts revealed by transcriptome profiling. Genome Biol. 2009;10(10):R104

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory