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Dlx6
Gene Detail
Symbol

Name
ID
Dlx6
distal-less homeobox 6
MGI:101927
Feature Type
protein coding gene
Genetic Map
Chromosome 6
2.83 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr6:6863334-6868568 bp, + strand
From VEGA annotation of GRCm38

  5235 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:87855  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: DLX6
Gene Tree: Dlx6

Human
homologs
DLX6, distal-less homeobox 6
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 1750
neXtProt AC: NX_P56179

Human Chr (Location): 7q22; chr7:97005978-97011040 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Targeted(3)
Genomic Mutations involving Dlx6 (1)
Incidental mutations (data from Mutagenetix , APF )
 
Homozygotes for targeted null mutations at both Dlx5 and Dlx6 exhibit bilateral ectrodactyly, homeotic transformation of the lower jaw into an upper jaw, and perinatal lethality.
 
Human Diseases Modeled in Mice Using Dlx6 (1)    Mutations Annotated to Human Diseases (2)   
Interactions
Dlx6 interacts with 216 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (14 annotations)
Process anatomical structure formation involved in morphogenesis, embryonic limb morphogenesis, ...
Component nucleus
Function DNA binding, sequence-specific DNA binding
External Resources: FuncBase
Expression
Literature Summary: (69 records)
Data Summary: Results (238)    Tissues (206)    Images (57)    Tissue x Stage Matrix (view)
Assay TypeResults
Immunohistochemistry 12
RNA in situ 226
cDNA source data(8)
Other mouse links: Allen Institute   GENSAT   GEO   Expression Atlas
Other vertebrate links: Xenbase dlx6 ; ZFIN dlx6a    NEW 
Molecular
reagents
All nucleic(17) Genomic(2) cDNA(12) Primer pair(1) Other(2)
Microarray probesets(4)
Other database
links
VEGA Gene Model OTTMUSG00000034244 (Evidence)
Ensembl Gene Model ENSMUSG00000029754 (Evidence)
Entrez Gene 13396 (Evidence)
NIA Mouse Gene Index U006522
Consensus CDS Project CCDS51719.1
International Mouse Phenotyping Consortium Status Dlx6
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000034244 VEGA Gene Model | MGI Sequence Detail 5235 C57BL/6J ±  kb
transcript OTTMUST00000086975 VEGA | MGI Sequence Detail 2216 Not Applicable 
polypeptide OTTMUSP00000047152 VEGA | MGI Sequence Detail 297 Not Applicable 

For the selected sequences
All sequences(30) RefSeq(3) UniProt(2)
Polymorphisms
SNPs within 2kb(21 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000047 Helix-turn-helix motif
InterPro IPR017970 Homeobox, conserved site
InterPro IPR001356 Homeodomain
InterPro IPR009057 Homeodomain-like
InterPro IPR020479 Homeodomain, metazoa
Protein Ontology PR:000006532 homeobox protein DLX-6
References
(Earliest) J:17176 Simeone A, et al., Cloning and characterization of two members of the vertebrate Dlx gene family. Proc Natl Acad Sci U S A. 1994 Mar 15;91(6):2250-4
(Latest) J:218837 Song H, et al., Ascl1 and Helt act combinatorially to specify thalamic neuronal identity by repressing Dlxs activation. Dev Biol. 2015 Feb 15;398(2):280-91
All references(98)
Disease annotation references (1)
Other
accession IDs
MGD-MRK-18758

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/28/2015
MGI 5.22
The Jackson Laboratory