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Ccser2 Gene Detail
Summary
  • Symbol
    Ccser2
  • Name
    coiled-coil serine rich 2
  • Synonyms
    1700012P13Rik, 2900054P12Rik, Gcap14
  • Feature Type
    protein coding gene
  • IDs
    MGI:101859
    NCBI Gene: 72972
  • Alliance
    gene page
  • Transcription Start Sites
    15 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:36874936-36968777 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 21.29 cM, cytoband B
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    840 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_101859
 protein coding gene Chr14:36874936-36968841 (-)
129S1/SvImJ MGP_129S1SvImJ_G0021183
 protein coding gene Chr14:30347801-30468920 (-)
A/J MGP_AJ_G0021131
 protein coding gene Chr14:29107125-29200411 (-)
AKR/J MGP_AKRJ_G0021108
 protein coding gene Chr14:30443505-30537560 (-)
BALB/cJ MGP_BALBcJ_G0021135
 protein coding gene Chr14:29336685-29430515 (-)
C3H/HeJ MGP_C3HHeJ_G0020918
 protein coding gene Chr14:30327338-30420847 (-)
C57BL/6NJ MGP_C57BL6NJ_G0021567
 protein coding gene Chr14:31463088-31558849 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0019129
 protein coding gene Chr14:29088978-29184947 (-)
CAST/EiJ MGP_CASTEiJ_G0020443
 protein coding gene Chr14:30195717-30308072 (-)
CBA/J MGP_CBAJ_G0020884
 protein coding gene Chr14:32625622-32726784 (-)
DBA/2J MGP_DBA2J_G0021007
 protein coding gene Chr14:29148836-29242112 (-)
FVB/NJ MGP_FVBNJ_G0020991
 protein coding gene Chr14:29127282-29221916 (-)
LP/J MGP_LPJ_G0021076
 protein coding gene Chr14:30658185-30759010 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0021017
 protein coding gene Chr14:31846211-31945456 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0021600
 protein coding gene Chr14:30291221-30400851 (-)
PWK/PhJ MGP_PWKPhJ_G0020191
 protein coding gene Chr14:28690258-28784957 (-)
SPRET/EiJ MGP_SPRETEiJ_G0020015
 protein coding gene Chr14:29831655-29934592 (-)
WSB/EiJ MGP_WSBEiJ_G0020498
 protein coding gene Chr14:30326732-30422747 (-)



Homology
more
  • Human Ortholog
    CCSER2, coiled-coil serine rich protein 2
  • Vertebrate Orthologs
    7
  • Human Ortholog
    CCSER2, coiled-coil serine rich protein 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    bA486O22.1, FAM190B, Gcap14, KIAA1128
  • Links
    NCBI Gene ID: 54462
    neXtProt AC: NX_Q9H7U1
    UniProt: Q9H7U1

  • Chr Location
    10q23.1; chr10:84328558-84518521 (+)  GRCh38.p7
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    74
  • Tissues
    11
  • cDNA Data
    22
  • Literature Summary
    2
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000058690 Ensembl Gene Model | MGI Sequence Detail 93842 C57BL/6J ±  kb
transcript ENSMUST00000067700 Ensembl | MGI Sequence Detail 7334 Not Applicable  
polypeptide ENSMUSP00000068550 Ensembl | MGI Sequence Detail 1038 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    8 Sequences
  • Protein Ontology
    PR:000031032 serine-rich coiled-coil domain-containing protein 2
    (term hierarchy)
  • InterPro Domains
    IPR029627 Serine-rich coiled-coil domain-containing protein
    IPR029629 Serine-rich coiled-coil domain-containing protein 2
Molecular
Reagents
less
  • All nucleic 24
    Genomic 2
    cDNA 22

    Microarray probesets 6
Other
Accession IDs
less
MGD-MRK-18683, MGI:1916586, MGI:1920222, MGI:2145593, MGI:2145799
References
more
  • Summaries
    All 30
    Developmental Gene Expression 2
    Gene Ontology 2
    Phenotypes 3
  • Earliest
    J:19885 Kambouris M, et al., Novel cDNA clones obtained by antibody screening of a mouse cerebellar cDNA expression library. Brain Res Mol Brain Res. 1994 Sep;25(3-4):183-91
  • Latest
    J:281311 Nakano Y, et al., Overlapping Activities of Two Neuronal Splicing Factors Switch the GABA Effect from Excitatory to Inhibitory by Regulating REST. Cell Rep. 2019 Apr 16;27(3):860-871.e8
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/11/2020
MGI 6.14 		The Jackson Laboratory