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Mapping Data
Experiment
  • Experiment
    RI
  • Chromosome
    11
  • Reference
    J:24223 Blackburn CC, et al., A high-resolution map of the chromosomal region surrounding the nude gene. Genomics. 1995 Mar 20;26(2):308-17
  • ID
    MGI:44921
Genes
GeneAlleleAssay TypeDescription
Chrnb1 reported elsewhere
Trp53 reported elsewhere
Zfp3 reported elsewhere
Slc2a4 reported elsewhere
Asgr1 reported elsewhere
Asgr2 reported elsewhere
Atp1b2 reported elsewhere
D11Nds1 PCR amplified length variant T31
Mpmv2 reported elsewhere
Brp8 reported elsewhere
D11Mit34 PCR amplified length variant A1113
Ccl1 Southern analysis Scya1 probe1
Ccl3 Southern analysis Scya3 probe1
Ccl4 Southern analysis Scya4 probe1
Xmv42 reported elsewhere
Mpo reported elsewhere
Notes
  • Reference
    Authors use Atpb-2, Tca-3, Mip-1a, Mip-1b and Akv4 for Atp1b2, Scya1, Scya3, Scya4 and Emv14 respectively.
RI
  • Origin
    C57BL/6J x DBA/2J
  • Designation
    BXD
  • Abbreviation 1
    B
  • Abbreviation 2
    D
RI Data (columns show RI Lines sampled)
Marker 1 2 5 6 8 9 11 12 13 14 15 16 18 19 20 21 22 23 24 25 27 28 29 30 31 32
Chrnb1 B D B D B B B B D B D D B D B D B B B B B D D B B D
Trp53 B D B D B B B B D B D D B D B D B B B B B D D B B D
Zfp3 B D B D B B B B D B D D B D B D B B B B B D D B B D
Slc2a4 B D B D B B B B D B D D B D B D B B B B B D D B B D
Asgr1 B D B D B B B B D B D D B D B D B B B B B D D B B D
Asgr2 B D B D B B B B D B D D B D B D B B B B B D D B B D
Atp1b2 B D B D B B B B D B D D B D B D B B B B B D D B B D
D11Nds1 B B B D B B B B D B D D B D B D B B B B B B D B B D
Mpmv2 B B B D B B B B D D D D . D B D B B B B B B D B B D
Brp8 B D B D B B B B D D D D B . . . B . B . . B D B . D
D11Mit34 D D B D B B B D D D D D B D B D B B B B B B D B B D
Ccl1 B D D B B D B D B D D D B D D D D B B B B B D B B D
Ccl3 B D D B B D B D B D D D B D D D D B B B B B D B B D
Ccl4 B D D B B D B D B D D D B D D D D B B B B B D B B D
Xmv42 B D D B B D B D B D D D B D D D D B B B B B D B B D
Mpo B D D B B D B D B D D D B D D D D B B B B B D B B D
Statistics
Marker 1 Marker 2 # Recombinants Total % Recombinants Std Error
Chrnb1 Trp53 0 26 0.000 0.000
Trp53 Zfp3 0 26 0.000 0.000
Zfp3 Slc2a4 0 26 0.000 0.000
Slc2a4 Asgr1 0 26 0.000 0.000
Asgr1 Asgr2 0 26 0.000 0.000
Asgr2 Atp1b2 0 26 0.000 0.000
Atp1b2 D11Nds1 2 26 2.174 1.670
D11Nds1 Mpmv2 1 25 1.064 1.109
Mpmv2 Brp8 1 18 1.515 1.606
Brp8 D11Mit34 2 19 3.125 2.482
D11Mit34 Ccl1 7 26 11.290 6.119
Ccl1 Ccl3 0 26 0.000 0.000
Ccl3 Ccl4 0 26 0.000 0.000
Ccl4 Xmv42 0 26 0.000 0.000
Xmv42 Mpo 0 26 0.000 0.000

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory