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Frat2 Gene Detail
 Symbol
Name
ID
Frat2
frequently rearranged in advanced T-cell lymphomas 2
MGI:2673967


Nomenclature History
Synonyms MGC:37615
Genetic Map
Chromosome 19
37.6 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 2)

Sequence Map
Chr19:41921706-41922401 bp, - strand
(From Ensembl annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle    (Mammalian Orthology)
Comparative Map (Mouse/Human Frat2 ± 2 cM)
TreeFam: TF330804
Sequences
Representative Sequences Length Strain/Species Flank
genomic ENSMUSG00000047604 Ensembl Gene Model | MGI Sequence Detail 696 C57BL/6J ± Kb
transcript NM_177603 RefSeq | MGI Sequence Detail 2176 C57BL/6
polypeptide Q8K025 UniProt | EBI | MGI Sequence Detail 231 Not Applicable
For the selected sequences
All sequences(12)
Alleles
and
phenotypes
All alleles(3) : Targeted, knock-out(1) Targeted, other(2)
Homozygous mice are healthy and fertile with no obvious abnormalities.
Polymorphisms SNPs within 2kb(1 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (2 annotations)
External Resources: FuncBase
Expression Literature Summary: (3 records)
Data Summary: Assays (2)    Results (96)    Tissues (96)    Images (14)
Theiler Stages: 11,13,22
  Assay Type Assays   Results
      RNA in situ 2   96
cDNA source data(16)
External Resources: Allen Brain Atlas  GENSAT  GEO  ArrayExpress 
Molecular
reagents
All nucleic(17) cDNA(16) Primer pair(1)
Microarray probesets(1)
Other database
links
Ensembl Gene Model ENSMUSG00000047604
DoTS DT.528043
Consensus CDS Project CCDS29813.1
UniGene 222723
DFCI TC1583512
NIA Mouse Gene Index U039040
Entrez Gene 212398
International Mouse Knockout Project Status Frat2
Protein
domains
InterPro ID Description
IPR008014 Glycogen synthase kinase-3 binding protein
Graphical View of Protein Domain Structure
References
(Earliest) J:82808 Strausberg RL et al., "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences." Proc Natl Acad Sci U S A 2002 Dec 24;99(26):16899-903
(Latest) J:141291 Tamplin OJ et al., "Microarray analysis of Foxa2 mutant mouse embryoa reveals novel gene expression and inductive roles for the gastrula organizer and its derivatives" BMC Genomics 2008;9(1):511
All references(6)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
02/06/2010
MGI_4.32
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The Jackson Laboratory