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En2 Gene Detail
 Symbol
Name
ID
En2
engrailed 2
MGI:95390


Nomenclature History
Synonyms En-2
Genetic Map
Chromosome 5
15.0 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 45)

Sequence Map
Chr5:28492236-28498706 bp, + strand
(From NCBI annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; horse; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human En2 ± 2 cM)
Protein SuperFamily: homeobox protein, EN-1/EN-2 type
TreeFam: TF106461
Sequences
Representative Sequences Length Strain/Species Flank
genomic 13799 NCBI Gene Model | MGI Sequence Detail 6471 C57BL/6J ± Kb
transcript NM_010134 RefSeq | MGI Sequence Detail 3537 C57BL/6
polypeptide P09066 UniProt | EBI | MGI Sequence Detail 324 Not Applicable
For the selected sequences
All sequences(18)
Alleles
and
phenotypes
All alleles(167) : Targeted, knock-out(5) Targeted, other(3) Gene trapped(159)
This locus affects anterior-posterior cerebellar patterning. Homozygous null mutants show altered foliation pattern and perform poorly in motor learning (rotarod) tests. Heterozygotes test intermediate on rotarod. Hypomorphs show no phenotypic effects.
Associated Human Diseases (2)   Alleles Annotated to Human Diseases (1)  
Polymorphisms All PCR and RFLP(15) : PCR(1) RFLP(14) SNPs within 2kb(16 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (15 annotations)
Process hindbrain development, midbrain development...
Component nucleus
Function DNA binding, sequence-specific DNA binding...
External Resources: FuncBase
Expression Literature Summary: (107 records)
Data Summary: Assays (37)    Results (345)    Tissues (128)    Images (73)
Theiler Stages: 11,12,13,14,15,16,17,19,20,21,22,23,24,25,26,28
  Assay Type Assays   Results
      Northern blot 3   29
      RT-PCR 4   139
      RNase protection 1   3
      RNA in situ 22   140
      Immunohistochemistry 7   34
cDNA source data(14)
External Resources: Allen Brain Atlas  GENSAT  GEO  ArrayExpress 
Molecular
reagents
All nucleic(36) Genomic(6) cDNA(16) Primer pair(4) Other(10) Antibodies(1)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000039095
DoTS DT.87072058, DT.91281408
Consensus CDS Project CCDS19143.1
UniGene 4298
DFCI TC1587739
NIA Mouse Gene Index U005384
Entrez Gene 13799
International Mouse Knockout Project Status En2
Protein
domains
InterPro ID Description
IPR000747 Homeobox engrailed
IPR001356 Homeobox
IPR009057 Homeodomain-like
IPR012287 Homeodomain-related
IPR015703 Homeobox protein, engrailed
IPR017970 Homeobox, conserved site
IPR019549 Homeobox engrailed, C-terminal
IPR019737 Homeobox engrailed-type, conserved site
IPR020479 Homeobox, region
Graphical View of Protein Domain Structure
References
(Earliest) J:9012 Joyner AL et al., "En-1 and En-2, two mouse genes with sequence homology to the Drosophila engrailed gene: expression during embryogenesis [published erratum appears in Genes Dev 1987 Jul;1(5):521]" Genes Dev 1987 Mar;1(1):29-38
(Latest) J:156169 Cheng Y et al., "The Engrailed homeobox genes determine the different foliation patterns in the vermis and hemispheres of the mammalian cerebellum." Development 2010 Feb;137(3):519-29
All references(180)
Other
accession IDs
MGD-MRK-9498, MGD-MRK-9500, MGI:2141264

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
02/06/2010
MGI_4.32
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