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B3galt5 Gene Detail
 Symbol
Name
ID
B3galt5
UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5
MGI:2136878


Nomenclature History
Synonyms 1190002B21Rik, b3Galt-V
Genetic Map
Chromosome 16
Syntenic
 
Mapping data( 3)
Sequence Map
Chr16:96457408-96541466 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
TreeFam: TF318639
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000020397 VEGA Gene Model | MGI Sequence Detail 84059 C57BL/6J ± Kb
transcript NM_001122993 RefSeq | MGI Sequence Detail 5281 C57BL/6
polypeptide Q9JI67 UniProt | EBI | MGI Sequence Detail 308 Not Applicable
For the selected sequences
All sequences(27)
Alleles
and
phenotypes
All alleles(1) : Targeted, other(1)
Homozygous mice for a targeted mutation appear normal.
Polymorphisms SNPs within 2kb(348 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications(8)
Process protein amino acid glycosylation
Component Golgi apparatus, integral to membrane...
Function galactosyltransferase activity, transferase activity...
External Resources: MouseFunc
Expression Literature Summary: (4 records)
Data Summary: Assays (6)    Results (149)    Tissues (112)    Images (20)
Theiler Stages: 13,15,17,20,22,23,26,28
  Assay Type Assays   Results
      RT-PCR 3   56
      In situ reporter (knock in) 1   45
      RNA in situ 2   48
cDNA source data(15)
External Resources: Allen Brain Atlas  GEO 
Molecular
reagents
All nucleic(18) cDNA(15) Primer pair(3)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000074892
DoTS DT.50315391, DT.55156775, DT.94223197
UniGene 154783
DFCI TC1599247, TC1600169
NIA Mouse Gene Index U017419
Entrez Gene 93961
VEGA Gene Model OTTMUSG00000020397
International Mouse Knockout Project Status B3galt5
Protein
domains
InterPro ID Description
IPR002659 Glycosyl transferase, family 31
Graphical View of Protein Domain Structure
References
(Earliest) J:60984 Ko MS et al., "Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development." Development 2000 Apr;127(8):1737-49
(Latest) J:82291 Zhu D et al., "Developmental regulation of beta-1,3-galactosyltransferase-1 gene expression in mouse brain." FEBS Lett 2003 Mar 13;538(1-3):163-7
All references(9)
Other
accession IDs
MGI:1916121, MGI:2146583

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
11/20/2009
MGI_4.31
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The Jackson Laboratory