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Chst9 Gene Detail
 Symbol
Name
ID
Chst9
carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
MGI:1918617

Nomenclature History
Synonyms 5430438D01Rik, GalNAc4ST-2
Genetic Map
Chromosome 18
cytoband A1
 
Mapping data( 2)
Sequence Map
Chr18:15610433-15918666 bp, - strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
TreeFam: TF325581
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000028196 VEGA Gene Model | MGI Sequence Detail 308234 C57BL/6J ± Kb
transcript NM_199055 RefSeq | MGI Sequence Detail 1369 C57BL/6
polypeptide Q76EC5 UniProt | EBI | MGI Sequence Detail 413 Not Applicable
For the selected sequences
All sequences(14)
Polymorphisms SNPs within 2kb(632 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Process carbohydrate biosynthetic process, carbohydrate metabolic process...
Component Golgi apparatus, integral to membrane...
Function N-acetylgalactosamine 4-O-sulfotransferase activity, sulfotransferase activity...
External Resources: FuncBase
Expression cDNA source data(3)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents 		All nucleic(3) cDNA(3)
Microarray probesets(1)
Other database
links
Ensembl Gene Model ENSMUSG00000047161
DoTS DT.101721870, DT.94189522
Consensus CDS Project CCDS29074.1
UniGene 329304
DFCI TC1596970, TC1620523
Entrez Gene 71367
VEGA Gene Model OTTMUSG00000028196
International Mouse Knockout Project Status Chst9
Protein
domains
InterPro ID Description
IPR005331 Sulfotransferase
IPR018011 Carbohydrate sulfotransferase-related
Graphical View of Protein Domain Structure
References
(Earliest) J:65060 Kawai J et al., "Functional annotation of a full-length mouse cDNA collection." Nature 2001 Feb 8;409(6821):685-90
(Latest) J:85262 Okuda T et al., "Mouse N-Acetylgalactosamine 4-Sulfotransferases-1 and -2. Molecular Cloning, Expression, Chromosomal Mapping and Detection of Their Activity with GalNAcbeta1-4GlcNAcbeta1-octyl." J Biochem 2003 Jul;134(1):111-20
All references(3)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/06/2010
MGI_4.32
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