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Clec1b Gene Detail
 Symbol
Name
ID
Clec1b
C-type lectin domain family 1, member b
MGI:1913287

Nomenclature History
Synonyms 1810061I13Rik, Clec-2, Clec2
Genetic Map
Chromosome 6
cytoband F3
 
Mapping data( 3)
Sequence Map
Chr6:129347315-129359353 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
TreeFam: TF336674
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000027001 VEGA Gene Model | MGI Sequence Detail 12039 C57BL/6J ± Kb
transcript NM_019985 RefSeq | MGI Sequence Detail 1134 C57BL/6
polypeptide Q9JL99 UniProt | EBI | MGI Sequence Detail 229 Not Applicable
For the selected sequences
All sequences(16)
Alleles
and
phenotypes 		All alleles(1) : Targeted, other(1)
Polymorphisms SNPs within 2kb(240 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (8 annotations)
Process cell surface receptor linked signal transduction
Component integral to membrane, integral to plasma membrane...
Function binding, receptor activity...
External Resources: FuncBase
Expression Literature Summary: (1 records)
Data Summary: Assays (1)    Results (2)    Tissues (2)
Theiler Stages: 20
  Assay Type Assays   Results
      RNA in situ 1   2
cDNA source data(6)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents 		All nucleic(7) cDNA(6) Other(1)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000030159
DoTS DT.40158399
Consensus CDS Project CCDS20586.1
UniGene 30700
DFCI TC1587460, TC1605067
Entrez Gene 56760
VEGA Gene Model OTTMUSG00000027001
International Mouse Knockout Project Status Clec1b
Protein
domains
InterPro ID Description
IPR001304 C-type lectin
IPR016186 C-type lectin-like
IPR016187 C-type lectin fold
Graphical View of Protein Domain Structure
References
(Earliest) J:64945 Colonna M et al., "Molecular characterization of two novel C-type lectin-like receptors, one of which is selectively expressed in human dendritic cells." Eur J Immunol 2000 Feb;30(2):697-704
(Latest) J:153848 May F et al., "CLEC-2 is an essential platelet-activating receptor in hemostasis and thrombosis." Blood 2009 Oct 15;114(16):3464-72
All references(10)
Other
accession IDs 		MGI:1923768, MGI:2141425
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/06/2010
MGI_4.32
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