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Clec4f Gene Detail
 Symbol
Name
ID
Clec4f
C-type lectin domain family 4, member f
MGI:1859834

Nomenclature History
Synonyms Clecsf13, D18063, kupffer cell receptor
Genetic Map
Chromosome 6
Syntenic
 
Mapping data( 2)
Sequence Map
Chr6:83594536-83606181 bp, - strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; cattle; rat    (Mammalian Orthology)
TreeFam: TF333341
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000027021 VEGA Gene Model | MGI Sequence Detail 11646 C57BL/6J ± Kb
transcript NM_016751 RefSeq | MGI Sequence Detail 2400 C57BL/6
polypeptide P70194 UniProt | EBI | MGI Sequence Detail 548 Not Applicable
For the selected sequences
All sequences(13)
Polymorphisms SNPs within 2kb(93 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (7 annotations)
Process endocytosis
Component integral to membrane, membrane...
Function binding, receptor activity...
External Resources: FuncBase
Expression cDNA source data(12)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents 		All nucleic(12) cDNA(12)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000014542
DoTS DT.530776
Consensus CDS Project CCDS20281.1
UniGene 3115
DFCI TC1586067
NIA Mouse Gene Index U027534
Entrez Gene 51811
VEGA Gene Model OTTMUSG00000027021
International Mouse Knockout Project Status Clec4f
Protein
domains
InterPro ID Description
IPR001304 C-type lectin
IPR002353 Type II antifreeze protein
IPR016186 C-type lectin-like
IPR016187 C-type lectin fold
IPR018378 C-type lectin, conserved site
Graphical View of Protein Domain Structure
References
J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs" Nature 2002;420():563-573
All references(3)
Other
accession IDs 		MGI:2141791
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support. 		last database update
02/06/2010
MGI_4.32
Web browser compatibility 		The Jackson Laboratory