About   Help   FAQ
Slc35a1 Gene Detail
 Symbol
Name
ID
Slc35a1
solute carrier family 35 (CMP-sialic acid transporter), member 1
MGI:1345622


Nomenclature History
Genetic Map
Chromosome 4
Syntenic
 
Mapping data( 2)
Sequence Map
Chr4:34610506-34634687 bp, - strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
Protein SuperFamily: nucleotide-sugar transporter
TreeFam: TF315345
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000006413 VEGA Gene Model | MGI Sequence Detail 24182 C57BL/6J ± Kb
transcript NM_011895 RefSeq | MGI Sequence Detail 2039 C57BL/6
polypeptide Q61420 UniProt | EBI | MGI Sequence Detail 336 Not Applicable
For the selected sequences
All sequences(19)
Alleles
and
phenotypes
All alleles(3) : Gene trapped(3)
Homozygous mutation of this gene results in lethality before weaning.
Polymorphisms SNPs within 2kb(164 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (11 annotations)
Process carbohydrate transport, nucleotide-sugar transport...
Component Golgi apparatus, Golgi membrane...
Function nucleotide-sugar transmembrane transporter activity, sugar:hydrogen symporter activity...
External Resources: FuncBase
Expression Literature Summary: (1 records)
Data Summary: Assays (2)    Results (12)    Tissues (12)
Theiler Stages: 10,18,23,25,28
  Assay Type Assays   Results
      Northern blot 2   12
cDNA source data(63)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents
All nucleic(64) cDNA(63) Other(1)
Microarray probesets(3)
Other database
links
Ensembl Gene Model ENSMUSG00000028293
DoTS DT.532699
Consensus CDS Project CCDS18030.1
UniGene 281885
DFCI TC1577342, TC1731358
NIA Mouse Gene Index U024932
Entrez Gene 24060
VEGA Gene Model OTTMUSG00000006413
International Mouse Knockout Project Status Slc35a1
Protein
domains
InterPro ID Description
IPR004689 UDP-galactose transporter
IPR007271 Nucleotide-sugar transporter
Graphical View of Protein Domain Structure
References
(Earliest) J:57553 Eckhardt M et al., "Expression cloning of the Golgi CMP-sialic acid transporter." Proc Natl Acad Sci U S A 1996 Jul 23;93(15):7572-6
(Latest) J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), "The Transcriptional Landscape of the Mammalian Genome" Science 2005;309(5740):1559-1563
All references(5)
Other
accession IDs
MGI:2140125, MGI:2140225

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
02/06/2010
MGI_4.32
Web browser compatibility
The Jackson Laboratory