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Lgals4 Gene Detail
 Symbol
Name
ID
Lgals4
lectin, galactose binding, soluble 4
MGI:107536


Nomenclature History
Synonyms galectin-4
Genetic Map
Chromosome 7
4.0 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 5)

Sequence Map
Chr7:29618994-29626722 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; pig, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Lgals4 ± 2 cM)
Protein SuperFamily: galectin
TreeFam: TF315551
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000022686 VEGA Gene Model | MGI Sequence Detail 7729 C57BL/6J ± Kb
transcript NM_010706 RefSeq | MGI Sequence Detail 1297 FVB/N
polypeptide Q8K419 UniProt | EBI | MGI Sequence Detail 326 Not Applicable
For the selected sequences
All sequences(26)
Polymorphisms RFLP(1) SNPs within 2kb(52 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Function protein binding, sugar binding...
External Resources: FuncBase
Expression Literature Summary: (2 records)
Data Summary: Assays (5)    Results (24)    Tissues (15)
Theiler Stages: 2,3,28
  Assay Type Assays   Results
      RT-PCR 3   21
      RNA in situ 1   2
      Immunohistochemistry 1   1
cDNA source data(12)
External Resources: Allen Brain Atlas  GENSAT  GEO  ArrayExpress 
Molecular
reagents
All nucleic(17) Genomic(1) cDNA(14) Primer pair(2) Antibodies(2)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000053964 (also overlaps Lgals6)
DoTS DT.102534270, DT.94339745
Consensus CDS Project CCDS21058.1
PDB 2DYC
DFCI TC1575048
Entrez Gene 16855
VEGA Gene Model OTTMUSG00000022686
International Mouse Knockout Project Status Lgals4
Protein
domains
InterPro ID Description
IPR001079 Galectin, carbohydrate recognition domain
IPR008985 Concanavalin A-like lectin/glucanase
IPR013320 Concanavalin A-like lectin/glucanase, subgroup
IPR015533 Galectin-4/6
Graphical View of Protein Domain Structure
References
(Earliest) J:33381 Jonassen T et al., "Isolation and sequencing of the rat Coq7 gene and the mapping of mouse Coq7 to chromosome 7. (Correction appears in Arch Biochem Biophys 1996; 335(1):227)" Arch Biochem Biophys 1996 Jun 15;330(2):285-9
(Latest) J:133198 Houzelstein D et al., "Lgals6, a 2-million-year-old gene in mice: a case of positive darwinian selection and presence/absence polymorphism." Genetics 2008 Mar;178(3):1533-45
All references(12)
Other
accession IDs
MGD-MRK-36106

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
02/06/2010
MGI_4.32
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