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St3gal2 Gene Detail
 Symbol
Name
ID
St3gal2
ST3 beta-galactoside alpha-2,3-sialyltransferase 2
MGI:99427


Nomenclature History
Synonyms Siat5, ST3GalII
Genetic Map
Chromosome 8
Syntenic
 
Mapping data( 3)
Sequence Map
Chr8:113443822-113496380 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
Protein SuperFamily: sialyltransferase
TreeFam: TF354325
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000031001 VEGA Gene Model | MGI Sequence Detail 52559 C57BL/6J ± Kb
transcript NM_009179 RefSeq | MGI Sequence Detail 4470 C57BL/6
polypeptide Q11204 UniProt | EBI | MGI Sequence Detail 350 Not Applicable
For the selected sequences
All sequences(33)
Alleles
and
phenotypes
All alleles(15) : Targeted, knock-out(1) Targeted, other(1) Gene trapped(13)
Mice homozygous for disruptions in this gene apparently display a normal phenotype.
Polymorphisms SNPs within 2kb(243 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Process protein amino acid glycosylation
Component extracellular region, Golgi apparatus...
Function sialyltransferase activity, transferase activity...
External Resources: FuncBase
Expression Literature Summary: (3 records)
Data Summary: Assays (4)    Results (48)    Tissues (19)
Theiler Stages: 12,20,22,24,26,28
  Assay Type Assays   Results
      RT-PCR 2   20
      Northern blot 2   28
cDNA source data(66)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents
All nucleic(68) cDNA(66) Primer pair(2)
Microarray probesets(4)
Other database
links
Ensembl Gene Model ENSMUSG00000031749
Consensus CDS Project CCDS22667.1
UniGene 200388
DFCI TC1576812, TC1615581
NIA Mouse Gene Index U009826, U201518
Entrez Gene 20444
VEGA Gene Model OTTMUSG00000031001
International Mouse Knockout Project Status St3gal2
Protein
domains
InterPro ID Description
IPR001675 Glycosyl transferase, family 29
IPR012163 Sialyltransferase
Graphical View of Protein Domain Structure
References
(Earliest) J:17521 Lee YC et al., "Cloning and expression of cDNA for a new type of Gal beta 1,3GalNAc alpha 2,3-sialyltransferase." J Biol Chem 1994 Apr 1;269(13):10028-33
(Latest) J:128836 Ngamukote S et al., "Developmental changes of glycosphingolipids and expression of glycogenes in mouse brains." J Neurochem 2007 Dec;103(6):2327-41
All references(10)
Other
accession IDs
MGD-MRK-16190, MGI:2142539, MGI:2142821

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
02/06/2010
MGI_4.32
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The Jackson Laboratory