About   Help   FAQ
GO Annotations Graph
 Symbol
Name
ID
Tardbp
TAR DNA binding protein
MGI:2387629

GO annotations  (Text View)    (Tabular View)

A table of the annotations represented in this image is provided below.
  • Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
  • Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
  • Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
  • Graph generated Fri Jan 17 13:56:29 2014.

CategoryGO IDClassification TermEvidenceReference
Molecular FunctionGO:0003677DNA bindingIEAJ:60000
Molecular FunctionGO:0003690double-stranded DNA bindingISOJ:164563
Molecular FunctionGO:0042802identical protein bindingISOJ:164563
Molecular FunctionGO:0003730mRNA 3'-UTR bindingISOJ:164563
Molecular FunctionGO:0003676nucleic acid bindingIEAJ:72247
Molecular FunctionGO:0000166nucleotide bindingIEAJ:72247
Molecular FunctionGO:0005515protein bindingIPIJ:190257
Molecular FunctionGO:0005515protein bindingIPIJ:193640
Molecular FunctionGO:0003723RNA bindingISOJ:164563
Molecular FunctionGO:0001205RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcriptionIDAJ:186828
Cellular ComponentGO:0005634nucleusISOJ:164563
Biological ProcessGO:00709353'-UTR-mediated mRNA stabilizationISOJ:164563
Biological ProcessGO:0006397mRNA processingIEAJ:60000
Biological ProcessGO:0043922negative regulation by host of viral transcriptionISOJ:164563
Biological ProcessGO:0045944positive regulation of transcription from RNA polymerase II promoterIDAJ:186828
Biological ProcessGO:0006355regulation of transcription, DNA-templatedIEAJ:60000
Biological ProcessGO:0008380RNA splicingISOJ:164563
Biological ProcessGO:0006366transcription from RNA polymerase II promoterIDAJ:186828
Biological ProcessGO:0006351transcription, DNA-templatedIEAJ:60000

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment
  IAS Inferred from ancestral seqeuence
  IBA Inferred from biological aspect of ancestor
  IBD Inferred from biological aspect of descendant
  IC Inferred by curator
  IDA Inferred from direct assay
  IEA Inferred from electronic annotation
  IEP Inferred from expression pattern
  IGC Inferred from genomic context
  IGI Inferred from genetic interaction
  IKR Inferred from key residues
  IMP Inferred from mutant phenotype
  IMR Inferred from missing residues
  IPI Inferred from physical interaction
  IRD Inferred from rapid divergence
  ISA Inferred from sequence alignment
  ISM Inferred from sequence model
  ISO Inferred from sequence orthology
  ISS Inferred from sequence or structural similarity
  NAS Non-traceable Author Statement
  ND No biological data available
  RCA Reviewed computational analysis
  TAS Traceable author statement
  NR Obsolete Evidence Code: Not Recorded

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
07/23/2014
MGI 5.19
The Jackson Laboratory