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GO Annotations Graph
 Symbol
Name
ID
Prdm16
PR domain containing 16
MGI:1917923

GO annotations  (Text View)    (Tabular View)

A table of the annotations represented in this image is provided below.
  • Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
  • Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
  • Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
  • Graph generated Wed Jul 23 12:17:05 2014.

CategoryGO IDClassification TermEvidenceReference
Molecular FunctionGO:0003677DNA bindingIEAJ:60000
Molecular FunctionGO:0046872metal ion bindingIEAJ:60000
Molecular FunctionGO:0046872metal ion bindingIEAJ:72247
Molecular FunctionGO:0003676nucleic acid bindingIEAJ:72247
Molecular FunctionGO:0005515protein bindingIPIJ:122807
Molecular FunctionGO:0005515protein bindingIPIJ:129891
Molecular FunctionGO:0005515protein bindingIPIJ:129891
Molecular FunctionGO:0005515protein bindingIPIJ:138823
Molecular FunctionGO:0005515protein bindingIPIJ:152000
Molecular FunctionGO:0005515protein bindingIPIJ:153416
Molecular FunctionGO:0005515protein bindingIPIJ:153416
Molecular FunctionGO:0043565sequence-specific DNA bindingIDAJ:129891
Molecular FunctionGO:0043565sequence-specific DNA bindingISOJ:164563
Molecular FunctionGO:0046332SMAD bindingIPIJ:122807
Molecular FunctionGO:0003713transcription coactivator activityIDAJ:129891
Molecular FunctionGO:0003713transcription coactivator activityIDAJ:138823
Cellular ComponentGO:0005634nucleusIDAJ:153416
Cellular ComponentGO:0005634nucleusISOJ:164563
Cellular ComponentGO:0017053transcriptional repressor complexIDAJ:153416
Biological ProcessGO:0050873brown fat cell differentiationIMPJ:129891
Biological ProcessGO:0050873brown fat cell differentiationIDAJ:138823
Biological ProcessGO:0050873brown fat cell differentiationIDAJ:152000
Biological ProcessGO:0050873brown fat cell differentiationIDAJ:153416
Biological ProcessGO:0030154cell differentiationIEAJ:60000
Biological ProcessGO:0030853negative regulation of granulocyte differentiationISOJ:164563
Biological ProcessGO:0000122negative regulation of transcription from RNA polymerase II promoterISOJ:164563
Biological ProcessGO:0045892negative regulation of transcription, DNA-templatedIDAJ:153416
Biological ProcessGO:0045892negative regulation of transcription, DNA-templatedISOJ:164563
Biological ProcessGO:0030512negative regulation of transforming growth factor beta receptor signaling pathwayIMPJ:157112
Biological ProcessGO:0022008neurogenesisIDAJ:144373
Biological ProcessGO:0060021palate developmentIMPJ:157112
Biological ProcessGO:0045893positive regulation of transcription, DNA-templatedIDAJ:152000
Biological ProcessGO:0045893positive regulation of transcription, DNA-templatedIDAJ:153416
Biological ProcessGO:0045893positive regulation of transcription, DNA-templatedISOJ:164563
Biological ProcessGO:0043457regulation of cellular respirationIDAJ:129891
Biological ProcessGO:0043457regulation of cellular respirationIDAJ:153416
Biological ProcessGO:0006355regulation of transcription, DNA-templatedIEAJ:60000
Biological ProcessGO:0035019somatic stem cell maintenanceIDAJ:150463
Biological ProcessGO:0043586tongue developmentIMPJ:157112
Biological ProcessGO:0006351transcription, DNA-templatedIEAJ:60000
Biological ProcessGO:0050872white fat cell differentiationIDAJ:153416

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment
  IAS Inferred from ancestral seqeuence
  IBA Inferred from biological aspect of ancestor
  IBD Inferred from biological aspect of descendant
  IC Inferred by curator
  IDA Inferred from direct assay
  IEA Inferred from electronic annotation
  IEP Inferred from expression pattern
  IGC Inferred from genomic context
  IGI Inferred from genetic interaction
  IKR Inferred from key residues
  IMP Inferred from mutant phenotype
  IMR Inferred from missing residues
  IPI Inferred from physical interaction
  IRD Inferred from rapid divergence
  ISA Inferred from sequence alignment
  ISM Inferred from sequence model
  ISO Inferred from sequence orthology
  ISS Inferred from sequence or structural similarity
  NAS Non-traceable Author Statement
  ND No biological data available
  RCA Reviewed computational analysis
  TAS Traceable author statement
  NR Obsolete Evidence Code: Not Recorded

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory