About   Help   FAQ
GO Annotations Graph
forkhead box D3

GO annotations  (Text View)    (Tabular View)

A table of the annotations represented in this image is provided below.
  • Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
  • Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
  • Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
  • Graph generated Thu Oct 8 15:06:18 2015.

CategoryGO IDClassification TermEvidenceReference
Molecular FunctionGO:0003677DNA bindingISOJ:155856
Molecular FunctionGO:0003690double-stranded DNA bindingISOJ:155856
Molecular FunctionGO:0000977RNA polymerase II regulatory region sequence-specific DNA bindingISOJ:164563
Molecular FunctionGO:0000981RNA polymerase II transcription factor activity, sequence-specific DNA bindingIBAJ:161428
Molecular FunctionGO:0043565sequence-specific DNA bindingIEAJ:72247
Molecular FunctionGO:0003700transcription factor activity, sequence-specific DNA bindingIDAJ:34243
Molecular FunctionGO:0044212transcription regulatory region DNA bindingIDAJ:29132
Molecular FunctionGO:0001227transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific bindingISOJ:164563
Cellular ComponentGO:0000790nuclear chromatinISOJ:164563
Cellular ComponentGO:0005634nucleusIBAJ:161428
Cellular ComponentGO:0005634nucleusICJ:34243
Cellular ComponentGO:0005667transcription factor complexTASJ:72300
Biological ProcessGO:0009653anatomical structure morphogenesisIBAJ:161428
Biological ProcessGO:0001892embryonic placenta developmentIMPJ:101652
Biological ProcessGO:0001701in utero embryonic developmentIDAJ:79491
Biological ProcessGO:0007275multicellular organismal developmentIEAJ:60000
Biological ProcessGO:0000122negative regulation of transcription from RNA polymerase II promoterIDAJ:34243
Biological ProcessGO:0000122negative regulation of transcription from RNA polymerase II promoterISOJ:164563
Biological ProcessGO:0045944positive regulation of transcription from RNA polymerase II promoterISOJ:164563
Biological ProcessGO:0006355regulation of transcription, DNA-templatedIEAJ:72247
Biological ProcessGO:0006355regulation of transcription, DNA-templatedIEAJ:60000
Biological ProcessGO:0006351transcription, DNA-templatedTASJ:72300
Biological ProcessGO:0001829trophectodermal cell differentiationIMPJ:101652

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment
  IAS Inferred from ancestral seqeuence
  IBA Inferred from biological aspect of ancestor
  IBD Inferred from biological aspect of descendant
  IC Inferred by curator
  IDA Inferred from direct assay
  IEA Inferred from electronic annotation
  IEP Inferred from expression pattern
  IGC Inferred from genomic context
  IGI Inferred from genetic interaction
  IKR Inferred from key residues
  IMP Inferred from mutant phenotype
  IMR Inferred from missing residues
  IPI Inferred from physical interaction
  IRD Inferred from rapid divergence
  ISA Inferred from sequence alignment
  ISM Inferred from sequence model
  ISO Inferred from sequence orthology
  ISS Inferred from sequence or structural similarity
  NAS Non-traceable Author Statement
  ND No biological data available
  RCA Reviewed computational analysis
  TAS Traceable author statement
  NR Obsolete Evidence Code: Not Recorded

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
MGI 6.02
The Jackson Laboratory