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GO Annotations Graph
 Symbol
Name
ID
Atrx
alpha thalassemia/mental retardation syndrome X-linked homolog (human)
MGI:103067

GO annotations  (Text View)    (Tabular View)

A table of the annotations represented in this image is provided below.
  • Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
  • Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
  • Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
  • Graph generated Wed Jul 23 12:17:05 2014.

CategoryGO IDClassification TermEvidenceReference
Molecular FunctionGO:0005524ATP bindingIEAJ:60000
Molecular FunctionGO:0005524ATP bindingIEAJ:72247
Molecular FunctionGO:0003682chromatin bindingIDAJ:93510
Molecular FunctionGO:0070087chromo shadow domain bindingISOJ:164563
Molecular FunctionGO:0003677DNA bindingIEAJ:60000
Molecular FunctionGO:0003677DNA bindingIEAJ:72247
Molecular FunctionGO:0015616DNA translocase activityISOJ:164563
Molecular FunctionGO:0004386helicase activityIEAJ:60000
Molecular FunctionGO:0042393histone bindingISOJ:164563
Molecular FunctionGO:0042393histone bindingIDAJ:167956
Molecular FunctionGO:0016787hydrolase activityIEAJ:60000
Molecular FunctionGO:0046872metal ion bindingIEAJ:60000
Molecular FunctionGO:0035064methylated histone bindingISOJ:164563
Molecular FunctionGO:0000166nucleotide bindingIEAJ:60000
Molecular FunctionGO:0005515protein bindingIPIJ:37212
Molecular FunctionGO:0005515protein bindingIPIJ:37212
Molecular FunctionGO:0005515protein bindingIPIJ:91881
Molecular FunctionGO:0005515protein bindingIPIJ:125897
Molecular FunctionGO:0005515protein bindingIPIJ:158584
Molecular FunctionGO:0005515protein bindingIPIJ:171630
Molecular FunctionGO:0005515protein bindingIPIJ:209584
Molecular FunctionGO:0008270zinc ion bindingIEAJ:72247
Cellular ComponentGO:0005694chromosomeIEAJ:60000
Cellular ComponentGO:0000781chromosome, telomeric regionIEAJ:60000
Cellular ComponentGO:0005737cytoplasmISOJ:164563
Cellular ComponentGO:0000792heterochromatinIDAJ:86777
Cellular ComponentGO:0000792heterochromatinIDAJ:91881
Cellular ComponentGO:0000792heterochromatinIDAJ:125897
Cellular ComponentGO:0005622intracellularIMPJ:209584
Cellular ComponentGO:0005739mitochondrionISOJ:164563
Cellular ComponentGO:0000228nuclear chromosomeIDAJ:71817
Cellular ComponentGO:0005730nucleolusISOJ:164563
Cellular ComponentGO:0005634nucleusIDAJ:125897
Cellular ComponentGO:0005634nucleusISOJ:164563
Cellular ComponentGO:0070603SWI/SNF superfamily-type complexISOJ:164563
Cellular ComponentGO:0031933telomeric heterochromatinIDAJ:160497
Biological ProcessGO:0006200ATP catabolic processISOJ:164563
Biological ProcessGO:0006974cellular response to DNA damage stimulusIEAJ:60000
Biological ProcessGO:0072711cellular response to hydroxyureaIMPJ:209584
Biological ProcessGO:0016568chromatin modificationIEAJ:60000
Biological ProcessGO:0006338chromatin remodelingISOJ:164563
Biological ProcessGO:0030330DNA damage response, signal transduction by p53 class mediatorIMPJ:209584
Biological ProcessGO:0006281DNA repairIEAJ:60000
Biological ProcessGO:0006336DNA replication-independent nucleosome assemblyISOJ:164563
Biological ProcessGO:0030900forebrain developmentIMPJ:95953
Biological ProcessGO:1901581negative regulation of telomeric RNA transcription from RNA pol II promoterIMPJ:167956
Biological ProcessGO:0006334nucleosome assemblyISOJ:164563
Biological ProcessGO:0010571positive regulation of nuclear cell cycle DNA replicationIMPJ:209584
Biological ProcessGO:0032206positive regulation of telomere maintenanceIMPJ:160497
Biological ProcessGO:0045944positive regulation of transcription from RNA polymerase II promoterISOJ:164563
Biological ProcessGO:0045944positive regulation of transcription from RNA polymerase II promoterIGIJ:171630
Biological ProcessGO:0006355regulation of transcription, DNA-templatedIEAJ:60000
Biological ProcessGO:0031297replication fork processingIMPJ:209584
Biological ProcessGO:0072520seminiferous tubule developmentIMPJ:171630
Biological ProcessGO:0060009Sertoli cell developmentIMPJ:171630
Biological ProcessGO:0007283spermatogenesisIMPJ:171630
Biological ProcessGO:0006351transcription, DNA-templatedIEAJ:60000

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment
  IAS Inferred from ancestral seqeuence
  IBA Inferred from biological aspect of ancestor
  IBD Inferred from biological aspect of descendant
  IC Inferred by curator
  IDA Inferred from direct assay
  IEA Inferred from electronic annotation
  IEP Inferred from expression pattern
  IGC Inferred from genomic context
  IGI Inferred from genetic interaction
  IKR Inferred from key residues
  IMP Inferred from mutant phenotype
  IMR Inferred from missing residues
  IPI Inferred from physical interaction
  IRD Inferred from rapid divergence
  ISA Inferred from sequence alignment
  ISM Inferred from sequence model
  ISO Inferred from sequence orthology
  ISS Inferred from sequence or structural similarity
  NAS Non-traceable Author Statement
  ND No biological data available
  RCA Reviewed computational analysis
  TAS Traceable author statement
  NR Obsolete Evidence Code: Not Recorded

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory