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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CSH1 HGNC:2440 (HGNC)
1442 (Entrez Gene)
150200 (OMIM)
CSH1 (Alliance of Genome Resources)
Chr17 q23.3 Chr17:63894909-63896661 (-)
GRCh38
P0DML2 (UniProt | EBI)
NM_022642 (RefSeq)
CSH2 HGNC:2441 (HGNC)
1443 (Entrez Gene)
118820 (OMIM)
CSH2 (Alliance of Genome Resources)
Chr17 q23.3 Chr17:63872012-63873766 (-)
GRCh38
P0DML3 (UniProt | EBI)
NM_022644 (RefSeq)
CSHL1 HGNC:2442 (HGNC)
1444 (Entrez Gene)
603515 (OMIM)
CSHL1 (Alliance of Genome Resources)
Chr17 q23.3 Chr17:63909597-63911341 (-)
GRCh38
Q14406 (UniProt | EBI)
NM_001321068 (RefSeq)
GH1 HGNC:4261 (HGNC)
2688 (Entrez Gene)
139250 (OMIM)
GH1 (Alliance of Genome Resources)
Chr17 q23.3 Chr17:63917200-63918839 (-)
GRCh38
acute lymphoblastic leukemia
anemia
autoimmune polyendocrine syndrome type 1
beta thalassemia
diabetic retinopathy
Diamond-Blackfan anemia
isolated growth hormone deficiency
isolated growth hormone deficiency type IA
isolated growth hormone deficiency type IB
isolated growth hormone deficiency type II
myocardial infarction
progeria
type 1 diabetes mellitus
P01241 (UniProt | EBI)
NM_022560 (RefSeq)
GH2 HGNC:4262 (HGNC)
2689 (Entrez Gene)
139240 (OMIM)
GH2 (Alliance of Genome Resources)
Chr17 q23.3 Chr17:63880215-63881944 (-)
GRCh38
P01242 (UniProt | EBI)
NM_002059 (RefSeq)
mouse Gh MGI:95707 (MGI)
14599 (Entrez Gene)
Gene Tree
Gh (Alliance of Genome Resources)
Chr11 68.89 cM Chr11:106191097-106192691 (-)
GRCm39
isolated growth hormone deficiency type II
ENSMUSG00000020713 (Ensembl Gene Model)
ENSMUSP00000099360 (Ensembl)
ENSMUST00000103071 (Ensembl)
rat Gh1 RGD:2686 (Rat Genome Database)
24391 (Entrez Gene)
Gh1 (Alliance of Genome Resources)
Chr10 q32.1 P01244 (UniProt | EBI)
NM_001034848 (RefSeq)
zebrafish gh1 ZDB-GENE-030725-2 (Zebrafish Model Organism Database)
407639 (Entrez Gene)
gh1 (Alliance of Genome Resources)
Chr3 NP_001018328 (RefSeq)
NM_001020492 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory