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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CSTA HGNC:2481 (HGNC)
1475 (Entrez Gene)
184600 (OMIM)
Cystatin A (MyGene.info)
CSTA (Alliance of Genome Resources)
Chr3 q21.1 Chr3:122325164-122341969 (+)
GRCh38.p7
P01040 (UniProt | EBI)
NM_005213 (RefSeq)
mouse Cstdc4 MGI:3645124 (MGI)
433016 (Entrez Gene)
Gene Tree
Cstdc4 (Alliance of Genome Resources)
Chr16 25.43 cM Chr16:36004582-36008481 (+)
GRCm39
433016 (NCBI Gene Model)
NP_001076016 (RefSeq)
NM_001082547 (RefSeq)
rat LOC100362978 RGD:2323715 (Rat Genome Database)
100362978 (Entrez Gene)
LOC100362978 (Alliance of Genome Resources)
Chr11 XP_038944837 (RefSeq)
zebrafish cst14a.1 ZDB-GENE-141031-1 (Zebrafish Model Organism Database)
573769 (Entrez Gene)
cst14a.1 (Alliance of Genome Resources)
Chr24 NP_001303248 (RefSeq)
NM_001316319 (RefSeq)
cst14a.2 ZDB-GENE-040426-1065 (Zebrafish Model Organism Database)
792225 (Entrez Gene)
cst14a.2 (Alliance of Genome Resources)
Chr24 NP_001096599 (RefSeq)
NM_001103129 (RefSeq)
cst14b.1 ZDB-GENE-061013-189 (Zebrafish Model Organism Database)
768128 (Entrez Gene)
cst14b.1 (Alliance of Genome Resources)
Chr5 NP_001070742 (RefSeq)
NM_001077274 (RefSeq)
cst14b.2 ZDB-GENE-140912-1 (Zebrafish Model Organism Database)
101886968 (Entrez Gene)
cst14b.2 (Alliance of Genome Resources)
Chr5 NP_001373748 (RefSeq)
NM_001386819 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/05/2021
MGI 6.17
The Jackson Laboratory