ARID1A Vertebrate HGNC

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Vertebrate Homology

Source

Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
- human
- mouse
- rat
- zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 04/16/2024 MGI 6.23

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences select all deselect all Go
human	ARID1A	HGNC:11110 (HGNC) 8289 (Entrez Gene) 603024 (OMIM) ARID1A (Alliance of Genome Resources)	Chr1 p36.11	Chr1:26693236-26782104 (+) GRCh38	breast cancer Coffin-Siris syndrome 2 colon cancer endometrial adenocarcinoma hepatocellular carcinoma Klatskin's tumor lung non-small cell carcinoma neuroblastoma ovarian clear cell carcinoma stomach cancer	O14497 (UniProt \| EBI) NM_018450 (RefSeq)
mouse	Arid1a	MGI:1935147 (MGI) 93760 (Entrez Gene) Gene Tree Arid1a (Alliance of Genome Resources)	Chr4 66.25 cM	Chr4:133406319-133484080 (-) GRCm39	Coffin-Siris syndrome	ENSMUSG00000007880 (Ensembl Gene Model) ENSMUSP00000122354 (Ensembl) ENSMUST00000145664 (Ensembl)
rat	Arid1a	RGD:1310500 (Rat Genome Database) 297867 (Entrez Gene) Arid1a (Alliance of Genome Resources)	Chr5 q36			NP_001388207 (RefSeq) NM_001401278 (RefSeq)
zebrafish	arid1aa	ZDB-GENE-080220-35 (Zebrafish Model Organism Database) 100141358 (Entrez Gene) arid1aa (Alliance of Genome Resources)	Chr16			XP_021322625 (RefSeq) NM_001114923 (RefSeq)
zebrafish	arid1ab	ZDB-GENE-030131-5725 (Zebrafish Model Organism Database) 568161 (Entrez Gene) arid1ab (Alliance of Genome Resources)	Chr19			XP_021323975 (RefSeq)