Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ARID1A
  • Mouse genes Arid1a
  • Rat genes Arid1a
  • Zfish genes arid1aa,arid1ab
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Arid1a

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0140658	ATP-dependent chromatin remodeler activity	Arid1a	IDA		Mouse	PMID:23129809
Molecular Function	GO:0003677	DNA binding	ARID1A	IDA		Human	PMID:23129809
Molecular Function	GO:0016922	nuclear receptor binding	ARID1A	IPI	UniProtKB:P03372	Human	PMID:17363140
Molecular Function	GO:0016922	nuclear receptor binding	ARID1A	IPI	UniProtKB:P10276	Human	PMID:17363140
Molecular Function	GO:0031491	nucleosome binding	Arid1a	IDA		Mouse	PMID:23129809
Molecular Function	GO:0005515	protein binding	ARID1A	IPI	UniProtKB:P51532	Human	PMID:11780067
Molecular Function	GO:0005515	protein binding	ARID1A	IPI	UniProtKB:P51532	Human	PMID:11988099
Molecular Function	GO:0005515	protein binding	ARID1A	IPI	UniProtKB:P51531	Human	PMID:12200431
Molecular Function	GO:0005515	protein binding	ARID1A	IPI	UniProtKB:P51532	Human	PMID:12200431
Molecular Function	GO:0005515	protein binding	ARID1A	IPI	UniProtKB:P51532	Human	PMID:12368262
Molecular Function	GO:0005515	protein binding	ARID1A	IPI	UniProtKB:P51532	Human	PMID:15985610
Molecular Function	GO:0005515	protein binding	ARID1A	IPI	UniProtKB:Q15788	Human	PMID:17363140
Molecular Function	GO:0005515	protein binding	ARID1A	IPI	UniProtKB:Q14526	Human	PMID:19486893
Molecular Function	GO:0005515	protein binding	ARID1A	IPI	UniProtKB:P51532	Human	PMID:23540691
Molecular Function	GO:0005515	protein binding	ARID1A	IPI	UniProtKB:Q92925	Human	PMID:30021884
Molecular Function	GO:0005515	protein binding	ARID1A	IPI	UniProtKB:P51532	Human	PMID:31759698
Molecular Function	GO:0005515	protein binding	ARID1A	IPI	UniProtKB:P51531	Human	PMID:34591612
Molecular Function	GO:0005515	protein binding	ARID1A	IPI	UniProtKB:P51532	Human	PMID:34591612
Molecular Function	GO:0005515	protein binding	ARID1A	IPI	UniProtKB:Q92925	Human	PMID:34591612
Molecular Function	GO:0005515	protein binding	Arid1a	IPI	UniProtKB:Q3TKT4	Mouse	MGI:MGI:5491971|PMID:23540691
Molecular Function	GO:0005515	protein binding	Arid1a	IPI	UniProtKB:O35845	Mouse	MGI:MGI:5142369|PMID:11988099
Molecular Function	GO:0005515	protein binding	Arid1a	IPI	UniProtKB:Q3TKT4	Mouse	MGI:MGI:5499063|PMID:23698369
Molecular Function	GO:0005515	protein binding	Arid1a	IPI	PR:Q6PDQ2	Mouse	PMID:24335282
Molecular Function	GO:0005515	protein binding	Arid1a	IPI	PR:O09106	Mouse	PMID:24335282
Molecular Function	GO:0005515	protein binding	Arid1a	IPI	PR:Q3TKT4	Mouse	PMID:16287714
Molecular Function	GO:0005515	protein binding	Arid1a	IPI	PR:Q9Z0H3	Mouse	PMID:16287714
Molecular Function	GO:0005515	protein binding	Arid1a	IPI	PR:P13864	Mouse	PMID:24335282
Molecular Function	GO:0005515	protein binding	Arid1a	IPI	PR:P97496	Mouse	PMID:16287714
Molecular Function	GO:0005515	protein binding	Arid1a	IPI	PR:O54941	Mouse	PMID:16287714
Cellular Component	GO:0000785	chromatin	ARID1A	IDA		Human	PMID:17363140
Cellular Component	GO:0000785	chromatin	Arid1a	IDA		Mouse	PMID:23129809
Cellular Component	GO:0071565	nBAF complex	Arid1a	IDA		Mouse	MGI:MGI:3775125|PMID:17640523
Cellular Component	GO:0071564	npBAF complex	Arid1a	IDA		Mouse	MGI:MGI:3775125|PMID:17640523
Cellular Component	GO:0005654	nucleoplasm	ARID1A	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016514	SWI/SNF complex	ARID1A	IDA		Human	PMID:11078522
Cellular Component	GO:0016514	SWI/SNF complex	ARID1A	IDA		Human	PMID:12200431
Cellular Component	GO:0016514	SWI/SNF complex	ARID1A	IDA		Human	PMID:8804307
Cellular Component	GO:0016514	SWI/SNF complex	ARID1A	IDA		Human	PMID:8895581
Cellular Component	GO:0016514	SWI/SNF complex	Arid1a	IDA		Mouse	PMID:16287714
Cellular Component	GO:0016514	SWI/SNF complex	Arid1a	IDA		Mouse	PMID:11318604
Cellular Component	GO:0070603	SWI/SNF superfamily-type complex	Arid1a	IDA		Mouse	PMID:12368262
Cellular Component	GO:0070603	SWI/SNF superfamily-type complex	Arid1a	IDA		Mouse	PMID:23129809
Cellular Component	GO:0070603	SWI/SNF superfamily-type complex	Arid1a	IDA		Mouse	PMID:23785148
Cellular Component	GO:0070603	SWI/SNF superfamily-type complex	Arid1a	IDA		Mouse	PMID:24335282
Biological Process	GO:0030521	androgen receptor signaling pathway	ARID1A	IDA		Human	PMID:12200431
Biological Process	GO:0003205	cardiac chamber development	Arid1a	IMP	MGI:MGI:5469314	Mouse	PMID:23129809
Biological Process	GO:0055007	cardiac muscle cell differentiation	Arid1a	IMP		Mouse	PMID:24335282
Biological Process	GO:0006325	chromatin organization	Arid1a	IPI	PR:Q6DIC0	Mouse	PMID:11318604
Biological Process	GO:0006338	chromatin remodeling	ARID1A	IDA		Human	PMID:11726552
Biological Process	GO:0006338	chromatin remodeling	Arid1a	IMP	MGI:MGI:3796520	Mouse	PMID:18448678
Biological Process	GO:0007566	embryo implantation	Arid1a	IMP	MGI:MGI:3796520	Mouse	PMID:18448678
Biological Process	GO:0030900	forebrain development	Arid1a	IMP	MGI:MGI:5469314	Mouse	PMID:23129809
Biological Process	GO:0001704	formation of primary germ layer	Arid1a	IMP	MGI:MGI:3796520	Mouse	PMID:18448678
Biological Process	GO:0007369	gastrulation	Arid1a	IMP	MGI:MGI:3796520	Mouse	PMID:18448678
Biological Process	GO:0042921	glucocorticoid receptor signaling pathway	ARID1A	IDA		Human	PMID:12200431
Biological Process	GO:0030520	intracellular estrogen receptor signaling pathway	ARID1A	IDA		Human	PMID:12200431
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Arid1a	IDA		Mouse	PMID:23129809
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Arid1a	IMP		Mouse	PMID:24335282
Biological Process	GO:0001843	neural tube closure	Arid1a	IMP	MGI:MGI:5469314	Mouse	PMID:23129809
Biological Process	GO:0006337	nucleosome disassembly	ARID1A	IDA		Human	PMID:8895581
Biological Process	GO:0003408	optic cup formation involved in camera-type eye development	Arid1a	IMP	MGI:MGI:5469314	Mouse	PMID:23129809
Biological Process	GO:0060674	placenta blood vessel development	Arid1a	IMP	MGI:MGI:5469314	Mouse	PMID:23129809
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	ARID1A	IDA		Human	PMID:12200431
Biological Process	GO:0019827	stem cell population maintenance	Arid1a	IMP	MGI:MGI:3796520	Mouse	PMID:18448678
Biological Process	GO:1901998	toxin transport	Arid1a	IMP		Mouse	PMID:23716698

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern