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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
2711

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CHST1 HGNC:1969 (HGNC)
8534 (Entrez Gene)
603797 (OMIM)
Chr11 p11.2 Chr11:45647689-45665656 (-)
GRCh38
O43916 (UniProt | EBI)
NM_003654 (RefSeq)
mouse Chst1 MGI:1924219 (MGI)
76969 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 51.17 cM Chr2:92599707-92615250 (+)
GRCm38
OTTMUSG00000014572 (VEGA)
OTTMUSP00000015459 (VEGA)
OTTMUST00000034542 (VEGA)
rat Chst1 295934 (Entrez Gene)
Chr3 q24 Q5RJQ0 (UniProt | EBI)
NM_001011955 (RefSeq)
chimpanzee CHST1 466500 (Entrez Gene)
Chr11 XP_521899 (RefSeq)
rhesus macaque CHST1 715176 (Entrez Gene)
Chr14 NP_001252840 (RefSeq)
NM_001265911 (RefSeq)
cattle CHST1 506932 (Entrez Gene)
Chr15 NP_001077117 (RefSeq)
NM_001083648 (RefSeq)
dog CHST1 483642 (Entrez Gene)
Chr18 XP_005631362 (RefSeq)
chicken CHST1 428866 (Entrez Gene)
Chr5 XP_426423 (RefSeq)
zebrafish chst1 445124 (Entrez Gene)
Chr25 Q6DBY9 (UniProt | EBI)
NM_001003518 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory