Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CHST1
  • Mouse genes Chst1
  • Rat genes Chst1
  • Zfish genes chst1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Chst1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0045130	keratan sulfotransferase activity	CHST1	IDA		Human	PMID:17690104
Molecular Function	GO:0045130	keratan sulfotransferase activity	CHST1	IDA		Human	PMID:9405439
Molecular Function	GO:0005515	protein binding	CHST1	IPI	UniProtKB:P27105	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CHST1	IPI	UniProtKB:Q8TED1	Human	PMID:32296183
Molecular Function	GO:0008146	sulfotransferase activity	CHST1	IDA		Human	PMID:10330415
Biological Process	GO:0006012	galactose metabolic process	CHST1	IDA		Human	PMID:10330415
Biological Process	GO:0018146	keratan sulfate biosynthetic process	CHST1	IDA		Human	PMID:17690104
Biological Process	GO:0042339	keratan sulfate metabolic process	CHST1	IDA		Human	PMID:9405439
Biological Process	GO:0006790	sulfur compound metabolic process	CHST1	IDA		Human	PMID:10330415

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern