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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
23033

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TRPM4 HGNC:17993 (HGNC)
54795 (Entrez Gene)
606936 (OMIM)
Chr19 q13.33 Chr19:49157759-49211841 (+)
GRCh38
Progressive Familial Heart Block, Type IB; PFHB1B
Q8TD43 (UniProt | EBI)
NM_017636 (RefSeq)
mouse Trpm4 MGI:1915917 (MGI)
68667 (Entrez Gene)
Gene Tree
VISTA-Point
Chr7 29.24 cM Chr7:45303155-45333780 (-)
GRCm38
68667 (NCBI Gene Model)
Q7TN37 (UniProt | EBI)
NM_175130 (RefSeq)
rat Trpm4 171143 (Entrez Gene)
Chr1 q22 Q9ESQ5 (UniProt | EBI)
NM_001136229 (RefSeq)
chimpanzee TRPM4 456197 (Entrez Gene)
Chr19 XP_512811 (RefSeq)
NM_001279814 (RefSeq)
rhesus macaque LOC719120 719120 (Entrez Gene)
Chr19 XP_001112814 (RefSeq)
cattle TRPM4 100295930 (Entrez Gene)
Chr18 XP_002695251 (RefSeq)
dog TRPM4 484385 (Entrez Gene)
Chr1 XP_541500 (RefSeq)
western clawed frog trpm5 100491327 (Entrez Gene)
ChrUN XP_002934673 (RefSeq)
zebrafish LOC100333667 100333667 (Entrez Gene)
Chr12 XP_002663943 (RefSeq)
LOC100334234 100334234 (Entrez Gene)
Chr12 XP_003199613 (RefSeq)
trpm4a 100004946 (Entrez Gene)
Chr3 NP_001275744 (RefSeq)
NM_001288815 (RefSeq)
trpm4c 799647 (Entrez Gene)
Chr12 NP_001269082 (RefSeq)
NM_001282153 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory