GATA6 Vertebrate HGNC

Vertebrate Homology

Source

Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences select all deselect all Go
human	GATA6	HGNC:4174 (HGNC) 2627 (Entrez Gene) 601656 (OMIM) GATA6 (Alliance of Genome Resources)	Chr18 q11.2	Chr18:22169589-22202528 (+) GRCh38	atrial heart septal defect 9 atrioventricular septal defect colorectal adenocarcinoma congenital heart disease Klatskin's tumor pancreatic hypoplasia-diabetes-congenital heart disease syndrome tetralogy of Fallot ventricular septal defect	Q92908 (UniProt \| EBI) NM_005257 (RefSeq)
mouse	Gata6	MGI:107516 (MGI) 14465 (Entrez Gene) Gene Tree Gata6 (Alliance of Genome Resources)	Chr18 5.63 cM	Chr18:11052510-11085636 (+) GRCm39		14465 (NCBI Gene Model) Q61169 (UniProt \| EBI) NM_010258 (RefSeq)
rat	Gata6	RGD:2666 (Rat Genome Database) 29300 (Entrez Gene) Gata6 (Alliance of Genome Resources)	Chr18 p13			P46153 (UniProt \| EBI) NM_019185 (RefSeq)
zebrafish	gata6	ZDB-GENE-000622-1 (Zebrafish Model Organism Database) 58076 (Entrez Gene) gata6 (Alliance of Genome Resources)	Chr2			NP_571632 (RefSeq) NM_001326364 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
- human
- mouse
- rat
- zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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