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Gene Expression Database (GXD)
GXD collects and integrates the gene expression information in MGI. Its primary emphasis is on endogenous gene expression during mouse development.
Access Data
Search for references on gene expression during development.
Gene Expression Literature Query
Search for detailed gene expression assay results.
Gene Expression Data Query
Search for genes expressed in some anatomical structures and/or developmental stages but not in others.
Gene Expression Data Expanded Query
Search or browse for anatomical structures; includes links to associated expression results.
Mouse Anatomical Dictionary Browser
Search the Edinburgh Mouse Atlas for anatomical terms and query for associated expression data.
EMAGE Anatomical Section Browser
Search for expression information based on tissue or cell-line origin of cDNAs.
cDNA Clone Query
FAQs
How do I...
.. find expression data for a specific gene and tissue? FAQ
.. find expression data for a tissue during development? FAQ
.. find genes expressed in one tissue but not another? FAQ
.. find references that report expression data for a gene at a specific age? FAQ
More FAQs
GXD Includes
06 Nov 2009
11,054
Genes studied in expression references
9,085
Genes with expression assay results
414,933
Expression assay results
68,713
Expression images
36,759
Expression assays
1,398
Mouse mutants with expression data
More...
Gene Expression News March 26, 2009
  • The MGI Batch Query tool now provides access to gene expression data in MGI. Enter a list of genes and click Gene Expression (under Additional Information).

  • The MGI Batch Query tool now supports the analysis of microarray expression data. It accepts microarray probeset IDs from two Affymetrix Platforms - Mouse Gene 1.0 ST Array and Mouse Genome 430A 2.0 Array. One can enter a list of up- or down-regulated probes from a microarray experiment and get different types of MGI data for the corresponding genes.

  • All microarray probeset to gene associations from the above mentioned array platforms are available for download at MGI Data and Statistical Reports. The microarray probeset to gene associations are updated on a regular basis.

  • Now available on gene detail pages (see External Resources: in the Expression section) are links to gene expression profile pages at GEO, the microarray repository at NCBI; links to summary pages of images generated by GENSAT, the Gene Expression Nervous System Atlas Project; and links to the Allen Brain Atlas, a database of gene expression patterns in the adult mouse brain.

MGI-Mouse Gene Expression Database (GXD): Send Us Your Data - Gene Expression Database (GXD): Send Us Your Data

Electronic submission speeds up the integration of your data, making it more quickly available and increasing its exposure. It also allows you to include more of your data; GXD accepts both published and unpublished data.

If you have any questions, please email us at gen@informatics.jax.org.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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Send questions and comments to User Support. 		last database update
11/06/2009
MGI_4.31
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