Gene Expression Database (GXD)
GXD collects and integrates the gene expression information in MGI. Its primary emphasis is on endogenous gene expression during mouse development.
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FAQs
- How do I...
- .. find expression data for a specific gene and tissue?
FAQ
- .. find expression data for a tissue during development?
FAQ
- .. find genes expressed in one tissue but not another?
FAQ
- .. find references that report expression data for a gene at a specific age?
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More FAQs
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- 14,410
- Genes studied in expression references
- 13,169
- Genes with expression assay results
- 1,134,771
- Expression assay results
- 222,917
- Expression images
- 56,906
- Expression assays
- 1,652
- Mouse mutants with expression data
More...
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Gene Expression News
August 16, 2011
- We are pleased to announce the inclusion of RNA in situ hybridization and immunohistochemistry data from the GenitoUrinary Development Molecular Anatomy Project (GUDMAP) database. You can view the data set at accession number J:171409. This set includes 92,569 results for: 3,123 genes; 3,561 assays (Immunohistochemistry and RNA in situ hybridizations for E10.5-E17.5 and postnatal specimens); and 8,730 image montages for ~25,000 individual images.
- GXD's gene expression data have been added, as a new dataset, to the MGI
implementation of BioMart. The GXD BioMart provides rapid access to gene
expression results. Search returns can be customized, and the results easily
downloaded for analysis in the lab. In addition, the GXD BioMart can be
interconnected with other BioMarts to enable queries across the combined
resources.
- We are pleased to announce the inclusion of RNA in situ hybridization data from the Brain Gene Expression Map (BGEM) database. You can view the data set at accession number
J:162220. This set includes 53,496 results for: 1,451 genes; 1,474 assays (RNA in situ hybridizations at E11.5, E15.5, P7 and P42); and 16,112 images. RNA in situ hybridization data from the Eurexpress project was also recently added to GXD. You can view the data set at accession number
J:153498. This set includes ~497,000 results for 6,594 genes in 7,052 assays with more than 118,400 images.
MGI-Mouse Gene Expression Database (GXD): Send Us Your Data - Gene Expression Database (GXD): Send Us Your Data
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Electronic submission speeds up the integration of your data, making it more quickly available and increasing
its exposure. It also allows you to include more of your data; GXD accepts both published and unpublished data.
If you have any questions, please email us at gen@informatics.jax.org.
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