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Gene Expression Data
Assay Details
Assay
Reference: J:199400 van den Heuvel DM, et al., Spatiotemporal expression of repulsive guidance molecules (RGMs) and their receptor neogenin in the mouse brain. PLoS One. 2013;8(2):e55828
Assay type: RNA in situ
MGI Accession ID: MGI:5693260
Gene symbol: Unc5d
Gene name: unc-5 netrin receptor D
Probe: Unc5d cDNA2
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Results
Specimen 2D: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: main olfactory bulb mitral cell layer Present 2D
TS24: main olfactory bulb prospective granule cell layer Weak 2D
TS24: olfactory epithelium Weak 2D
TS24: main olfactory bulb ventricular layer Strong 2D

Specimen 2H: postnatal day 5 (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb glomerular layer Present 2H Expression was reduced compared to E16.5.
TS28: main olfactory bulb granule cell layer Present 2H Expression was reduced compared to E16.5.
TS28: main olfactory bulb mitral cell layer Present 2H Expression was reduced compared to E16.5.

Specimen Table S2 E16.5: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: accessory olfactory bulb Moderate
TS24: main olfactory bulb internal plexiform layer Moderate
TS24: main olfactory bulb prospective granule cell layer Moderate
TS24: olfactory epithelium Moderate
TS24: ethmoid bone cribriform plate Absent
TS24: main olfactory bulb external plexiform layer Weak
TS24: main olfactory bulb prospective glomerular layer Weak
TS24: main olfactory bulb ventricular layer Very strong
TS24: main olfactory bulb mitral cell layer Strong

Specimen Table S2 P5: postnatal day 5 (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb glomerular layer Weak
TS28: main olfactory bulb granule cell layer Weak
TS28: ethmoid bone cribriform plate Absent
TS28: main olfactory bulb external plexiform layer Absent
TS28: main olfactory bulb internal plexiform layer Absent
TS28: olfactory epithelium Absent
TS28: main olfactory bulb mitral cell layer Moderate
TS28: main olfactory bulb ventricular layer Moderate
TS28: anterior olfactory nucleus Strong

Specimen Table S2 Adult: postnatal adult (more )
Structure Level Pattern Image Note
TS28: anterior olfactory nucleus Weak
TS28: main olfactory bulb glomerular layer Weak
TS28: main olfactory bulb ventricular layer Weak
TS28: main olfactory bulb external plexiform layer Absent
TS28: main olfactory bulb granule cell layer Absent
TS28: main olfactory bulb internal plexiform layer Absent
TS28: main olfactory bulb mitral cell layer Moderate

Specimen 5D: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: cerebral cortex subventricular zone Strong 5D
TS24: cerebral cortex ventricular layer Present 5D

Specimen 5H: postnatal day 5 (more )
Structure Level Pattern Image Note
TS28: cortical layer I Present 5H
TS28: cortical layer II Present 5H
TS28: cortical layer III Present 5H
TS28: cortical layer IV Present 5H

Specimen Table S3 E16.5: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: cerebral cortex intermediate zone Absent
TS24: cerebral cortex marginal layer Absent
TS24: cortical plate Absent
TS24: cortical subplate Absent
TS24: telencephalon pia mater Absent
TS24: cerebral cortex subventricular zone Strong
TS24: cerebral cortex ventricular layer Weak

Specimen Table S3 P5: postnatal day 5 (more )
Structure Level Pattern Image Note
TS28: cortical layer I Moderate
TS28: cortical layer II Moderate
TS28: cortical layer III Moderate
TS28: cortical layer IV Moderate
TS28: cerebral cortex ventricular zone Absent
TS28: cortical layer V Absent
TS28: cortical layer VI Absent

Specimen Table S3 Adult: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cortical layer I Moderate
TS28: cortical layer II Moderate
TS28: cortical layer III Moderate
TS28: cortical layer IV Moderate
TS28: cerebral cortex ventricular zone Absent
TS28: cortical layer V Absent
TS28: cortical layer VI Absent

Specimen 7D: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: dentate gyrus primordium Present 7D
TS24: hippocampus Present Regionally restricted 7D Expression was detected in the CA region.

Specimen 7H: postnatal day 5 (more )
Structure Level Pattern Image Note
TS28: dentate gyrus Present 7H
TS28: hippocampus CA3 Present 7H

Specimen Table S4 E16.5: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: hippocampus Moderate Regionally restricted There was strong expression in the subventricular zone. No expression was in the CA region.
TS24: dentate gyrus primordium Moderate
TS24: entorhinal cortex Moderate
TS24: hippocampus ventricular layer Weak

Specimen Table S4 P5: postnatal day 5 (more )
Structure Level Pattern Image Note
TS28: hippocampus CA1 Absent
TS28: hippocampus CA2 Absent
TS28: hippocampus CA3 Strong
TS28: dentate gyrus Weak
TS28: dentate gyrus granule cell layer Weak
TS28: dentate gyrus molecular layer Absent
TS28: dentate gyrus polymorphic layer Moderate
TS28: hippocampus stratum oriens Weak
TS28: hippocampus stratum lacunosum Absent
TS28: hippocampus stratum radiatum Absent
TS28: entorhinal cortex Moderate

Specimen Table S4 Adult: postnatal adult (more )
Structure Level Pattern Image Note
TS28: hippocampus CA1 Weak
TS28: hippocampus CA2 Weak
TS28: hippocampus CA3 Moderate
TS28: dentate gyrus Weak
TS28: dentate gyrus granule cell layer Weak
TS28: dentate gyrus polymorphic layer Weak
TS28: dentate gyrus molecular layer Absent
TS28: entorhinal cortex Absent
TS28: hippocampus stratum lacunosum Absent
TS28: hippocampus stratum oriens Absent
TS28: hippocampus stratum radiatum Absent

Specimen 10D: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: lateral habenular nucleus Present 10D

Specimen 10H: postnatal day 5 (more )
Structure Level Pattern Image Note
TS28: lateral habenular nucleus Present 10H

Specimen 10L: postnatal adult (more )
Structure Level Pattern Image Note
TS28: habenula Absent 10L

Specimen Table S5 E16.5: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: midbrain Moderate Regionally restricted Expression was detected in the substantia nigra and the ventral tegmental area.
TS24: interpeduncular nucleus Strong
TS24: telencephalon septum Strong
TS24: corpus striatum Moderate
TS24: lateral habenular nucleus Moderate
TS24: hypothalamus Strong Regionally restricted Expression was strong in the lateral hypothalamus.
TS24: medial habenular nucleus Absent
TS24: thalamus Absent

Specimen Table S5 P5: postnatal day 5 (more )
Structure Level Pattern Image Note
TS28: lateral habenular nucleus Moderate
TS28: substantia nigra Moderate
TS28: telencephalon septum Moderate
TS28: ventral tegmental area Moderate
TS28: hypothalamus lateral zone Weak
TS28: paraventricular thalamic nucleus Weak
TS28: thalamus Weak
TS28: corpus striatum Absent
TS28: interpeduncular nucleus Absent
TS28: medial habenular nucleus Absent

Specimen Table S5 Adult: postnatal adult (more )
Structure Level Pattern Image Note
TS28: telencephalon septum Weak
TS28: corpus striatum Absent
TS28: hypothalamus lateral zone Absent
TS28: interpeduncular nucleus Absent
TS28: lateral habenular nucleus Absent
TS28: medial habenular nucleus Absent
TS28: paraventricular thalamic nucleus Absent
TS28: substantia nigra Absent
TS28: thalamus Absent
TS28: ventral tegmental area Absent

Specimen 13D: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: cerebellum external granule cell layer Absent 13D

Specimen 13H: postnatal day 5 (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Weak 13H

Specimen Table S6 E16.5: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: cerebellum Purkinje cell cluster Strong
TS24: deep cerebellar nucleus Strong
TS24: cerebellum external granule cell layer Absent
TS24: cerebellum ventricular layer Absent

Specimen Table S6 P5: postnatal day 5 (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Moderate
TS28: cerebellum external granule cell layer Absent
TS28: cerebellum internal granule cell layer Absent

Specimen Table S6 Adult: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Moderate
TS28: cerebellum granule cell layer Absent
TS28: cerebellum molecular layer Absent


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
01/14/2020
MGI 6.14
The Jackson Laboratory