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Rbbp8nl Gene Detail
Summary
  • Symbol
    Rbbp8nl
  • Name
    RBBP8 N-terminal like
  • Synonyms
    BC066135
  • Feature Type
    protein coding gene
  • IDs
    MGI:3606212
    NCBI Gene: 271887
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr2:179919439-179931672 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 102.80 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    101 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3606212
 protein coding gene Chr2:179917039-179931693 (-)
129S1/SvImJ MGP_129S1SvImJ_G0026992
 protein coding gene Chr2:186793487-186805718 (-)
A/J MGP_AJ_G0026958
 protein coding gene Chr2:179117066-179129300 (-)
AKR/J MGP_AKRJ_G0026928
 protein coding gene Chr2:184486360-184498636 (-)
BALB/cJ MGP_BALBcJ_G0026967
 protein coding gene Chr2:179581408-179593645 (-)
C3H/HeJ MGP_C3HHeJ_G0026708
 protein coding gene Chr2:184828534-184840772 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027413
 protein coding gene Chr2:192180265-192194357 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0026167
 protein coding gene Chr2:183075716-183087974 (-)
CBA/J MGP_CBAJ_G0026685
 protein coding gene Chr2:199178768-199191011 (-)
DBA/2J MGP_DBA2J_G0026823
 protein coding gene Chr2:178216503-178228774 (-)
FVB/NJ MGP_FVBNJ_G0026789
 protein coding gene Chr2:176822954-176835189 (-)
LP/J MGP_LPJ_G0026924
 protein coding gene Chr2:186791866-186804128 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0026808
 protein coding gene Chr2:201793208-201805454 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027472
 protein coding gene Chr2:184442587-184454820 (-)
PWK/PhJ MGP_PWKPhJ_G0025903
 protein coding gene Chr2:175725944-175738197 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025703
 protein coding gene Chr2:180939843-180953963 (-)
WSB/EiJ MGP_WSBEiJ_G0026239
 protein coding gene Chr2:185422358-185434594 (-)



Homology
more
  • Human Ortholog
    RBBP8NL, RBBP8 N-terminal like
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RBBP8NL, RBBP8 N-terminal like
  • Synonyms
    C20orf151
  • Links
    NCBI Gene ID: 140893
    neXtProt AC: NX_Q8NC74
    UniProt: Q8NC74

  • Chr Location
    20q13.33; chr20:62410237-62427539 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    4 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000038980 Ensembl Gene Model | MGI Sequence Detail 12234 C57BL/6J ±  kb
transcript ENSMUST00000038529 Ensembl | MGI Sequence Detail 2319 Not Applicable  
polypeptide ENSMUSP00000047237 Ensembl | MGI Sequence Detail 614 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR019518 DNA endonuclease Ctp1, N-terminal
    IPR033316 DNA endonuclease RBBP8-like
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 1
References
more
  • Summaries
    All 17
    Phenotypes 4
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:293217 GemPharmatech, GemPharmatech Website. 2020;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory