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Xrra1 Gene Detail
Summary
  • Symbol
    Xrra1
  • Name
    X-ray radiation resistance associated 1
  • Feature Type
    protein coding gene
  • IDs
    MGI:2181647
    NCBI Gene: 446101
  • Alliance
    gene page
  • Transcription Start Sites
    10 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:99508425-99567031 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 54.15 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    576 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2181647
 protein coding gene Chr7:99508323-99567031 (+)
129S1/SvImJ MGP_129S1SvImJ_G0032559
 protein coding gene Chr7:102695459-102753996 (+)
A/J MGP_AJ_G0032533
 protein coding gene Chr7:100136105-100195249 (+)
AKR/J MGP_AKRJ_G0032469
 protein coding gene Chr7:102520055-102578894 (+)
BALB/cJ MGP_BALBcJ_G0032544
 protein coding gene Chr7:99804141-99863046 (+)
C3H/HeJ MGP_C3HHeJ_G0032259
 protein coding gene Chr7:102874897-102936875 (+)
C57BL/6NJ MGP_C57BL6NJ_G0033042
 protein coding gene Chr7:106613182-106676012 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030036
 protein coding gene Chr7:102535218-102597235 (+)
CAST/EiJ MGP_CASTEiJ_G0031586
 protein coding gene Chr7:94402747-94467039 (+)
CBA/J MGP_CBAJ_G0032226
 protein coding gene Chr7:110292504-110362436 (+)
DBA/2J MGP_DBA2J_G0032377
 protein coding gene Chr7:98458703-98519388 (+)
FVB/NJ MGP_FVBNJ_G0032334
 protein coding gene Chr7:98255957-98315578 (+)
LP/J MGP_LPJ_G0032467
 protein coding gene Chr7:104052585-104120989 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0032367
 protein coding gene Chr7:111712273-111771926 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0033064
 protein coding gene Chr7:101780208-101841553 (+)
PWK/PhJ MGP_PWKPhJ_G0031304
 protein coding gene Chr7:91556014-91618582 (+)
SPRET/EiJ MGP_SPRETEiJ_G0031147
 protein coding gene Chr7:89084440-89146454 (+)
WSB/EiJ MGP_WSBEiJ_G0031703
 protein coding gene Chr7:102461944-102524252 (+)



Homology
more
  • Human Ortholog
    XRRA1, X-ray radiation resistance associated 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    XRRA1, X-ray radiation resistance associated 1
  • Links
    NCBI Gene ID: 143570
    neXtProt AC: NX_Q6P2D8
    UniProt: Q6P2D8

  • Chr Location
    11q13.4; chr11:74807739-74949200 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    9
  • GO References
    3
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    7
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 446101 NCBI Gene Model | MGI Sequence Detail 58607 C57BL/6J ±  kb
transcript NM_001164258 RefSeq | MGI Sequence Detail 2631 Not Specified  
polypeptide Q3U3V8 UniProt | EBI | MGI Sequence Detail 786 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 1
Other
Accession IDs
less
MGI:2141964
References
more
  • Summaries
    All 31
    Gene Ontology 3
    Phenotypes 11
  • Earliest
    J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory