About   Help   FAQ
Snord22 Gene Detail
Summary
  • Symbol
    Snord22
  • Name
    small nucleolar RNA, C/D box 22
  • Synonyms
    Rnu22, U22
  • Feature Type
    snoRNA gene
  • IDs
    MGI:1933385
    NCBI Gene: 100127111
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:8703230-8703355 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 5.44 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    6 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1933385
 snoRNA gene Chr19:8703230-8703355 (+)
129S1/SvImJ MGP_129S1SvImJ_G0038957
 snoRNA gene Chr19:5994299-5994424 (+)
A/J MGP_AJ_G0038952
 snoRNA gene Chr19:5677562-5677687 (+)
AKR/J MGP_AKRJ_G0038887
 snoRNA gene Chr19:5763629-5763754 (+)
BALB/cJ MGP_BALBcJ_G0038935
 snoRNA gene Chr19:5780341-5780466 (+)
C3H/HeJ MGP_C3HHeJ_G0038599
 snoRNA gene Chr19:5846915-5847040 (+)
C57BL/6NJ MGP_C57BL6NJ_G0039485
 snoRNA gene Chr19:6114592-6114717 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0036210
 snoRNA gene Chr19:5918094-5918219 (+)
CAST/EiJ MGP_CASTEiJ_G0037740
 snoRNA gene Chr19:5494723-5494848 (+)
CBA/J MGP_CBAJ_G0038570
 snoRNA gene Chr19:6227182-6227307 (+)
DBA/2J MGP_DBA2J_G0038759
 snoRNA gene Chr19:5507672-5507797 (+)
FVB/NJ MGP_FVBNJ_G0038711
 snoRNA gene Chr19:5583383-5583508 (+)
LP/J MGP_LPJ_G0038799
 snoRNA gene Chr19:5886026-5886151 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0038712
 snoRNA gene Chr19:6102611-6102736 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0040234
 snoRNA gene ChrX:129040328-129040453 (+)
PWK/PhJ MGP_PWKPhJ_G0037424
 snoRNA gene Chr19:5173205-5173330 (+)
SPRET/EiJ MGP_SPRETEiJ_G0037179
 snoRNA gene Chr19:5406716-5406841 (+)
WSB/EiJ MGP_WSBEiJ_G0037968
 snoRNA gene Chr19:5772989-5773114 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100127111 NCBI Gene Model | MGI Sequence Detail 126 C57BL/6J ±  kb
transcript NR_004445 RefSeq | MGI Sequence Detail 126 Not Specified  
For the selected sequence
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 9
    Developmental Gene Expression 1
    Gene Ontology 1
  • Earliest
    J:49278 Tycowski KT, et al., A mammalian gene with introns instead of exons generating stable RNA products [see comments]. Nature. 1996 Feb 1;379(6564):464-6
  • Latest
    J:234504 Shum EY, et al., The Antagonistic Gene Paralogs Upf3a and Upf3b Govern Nonsense-Mediated RNA Decay. Cell. 2016 Apr 7;165(2):382-95
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory