About   Help   FAQ
Spata31d1a Gene Detail
Summary
  • Symbol
    Spata31d1a
  • Name
    spermatogenesis associated 31 subfamily D, member 1A
  • Synonyms
    1700013B16Rik, Fam75d1a, Fam75d3
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919469
    NCBI Gene: 72219
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr13:59847897-59854401 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 31.87 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    72 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919469
 protein coding gene Chr13:59847620-59858144 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0020595
 protein coding gene Chr13:57193573-57199619 (-)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0020591
 protein coding gene Chr13:57454361-57461898 (-)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0021025
 protein coding gene Chr13:61202264-61212392 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0018607
 protein coding gene Chr13:55083435-55089453 (-)
CAST/EiJ MGP_CASTEiJ_G0019906
 protein coding gene Chr13:58902333-58909309 (-)
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0020481
 protein coding gene Chr13:62816011-62834038 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0021068
 protein coding gene Chr13:58508228-58518289 (-)
PWK/PhJ MGP_PWKPhJ_G0019660
 protein coding gene Chr13:56765865-56773619 (-)
SPRET/EiJ MGP_SPRETEiJ_G0019487
 protein coding gene Chr13:57385777-57392092 (-)
WSB/EiJ MGP_WSBEiJ_G0019966
 protein coding gene Chr13:58954586-58960997 (-)



Homology
more
  • Human Ortholog
    SPATA31D1, SPATA31 subfamily D member 1
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SPATA31D1, SPATA31 subfamily D member 1
  • Synonyms
    FAM75D1
  • Links
    NCBI Gene ID: 389763
    neXtProt AC: NX_Q6ZQQ2
    UniProt: Q6ZQQ2

  • Chr Location
    9q21.32; chr9:81987405-81995253 (+)  GRCh38
  • Human Ortholog
    SPATA31D3, SPATA31 subfamily D member 3
  • Synonyms
    FAM75D3
  • Links
    NCBI Gene ID: 389762
    neXtProt AC: NX_P0C874
    UniProt: P0C874

  • Chr Location
    9q21.32; chr9:81943500-81950093 (+)  GRCh38
  • Human Ortholog
    SPATA31D4, SPATA31 subfamily D member 4
  • Synonyms
    FAM75D3, FAM75D4, SPATA31D3
  • Links
    NCBI Gene ID: 389761
    neXtProt AC: NX_Q6ZUB0
    UniProt: Q6ZUB0

  • Chr Location
    9q21.32; chr9:81928428-81934998 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    1
  • Gene trapped
    2
  • Genomic Mutations
    1 involving Spata31d1a
  • Incidental Mutations
    APF , CvDC
  • Find Mice (IMSR)
    36 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    6
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 72219 NCBI Gene Model | MGI Sequence Detail 6505 C57BL/6J ±  kb
transcript NM_028157 RefSeq | MGI Sequence Detail 4281 C57BL/6  
polypeptide NP_082433 RefSeq | MGI Sequence Detail 1336 C57BL/6  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 1
References
more
  • Summaries
    All 20
    Phenotypes 6
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory