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Btbd17 Gene Detail
Summary
  • Symbol
    Btbd17
  • Name
    BTB domain containing 17
  • Synonyms
    1500005I02Rik, Tango10a
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919264
    NCBI Gene: 72014
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:114682043-114686771 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 80.54 cM, cytoband E2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    5 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919264
 protein coding gene Chr11:114681495-114692738 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019360
 protein coding gene Chr11:118731166-118735892 (-)
A/J MGP_AJ_G0019329
 protein coding gene Chr11:113569295-113574023 (-)
AKR/J MGP_AKRJ_G0019297
 protein coding gene Chr11:116928669-116933391 (-)
BALB/cJ MGP_BALBcJ_G0019302
 protein coding gene Chr11:113988579-113993305 (-)
C3H/HeJ MGP_C3HHeJ_G0019111
 protein coding gene Chr11:117277886-117282614 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019753
 protein coding gene Chr11:122296110-122300838 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017376
 protein coding gene Chr11:110635854-110640634 (-)
CAST/EiJ MGP_CASTEiJ_G0018665
 protein coding gene Chr11:118609423-118626199 (-)
CBA/J MGP_CBAJ_G0019081
 protein coding gene Chr11:127184021-127188749 (-)
DBA/2J MGP_DBA2J_G0019193
 protein coding gene Chr11:113011638-113016374 (-)
FVB/NJ MGP_FVBNJ_G0019184
 protein coding gene Chr11:112494670-112499406 (-)
LP/J MGP_LPJ_G0019263
 protein coding gene Chr11:119136580-119141306 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019215
 protein coding gene Chr11:126343911-126348633 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019790
 protein coding gene Chr11:117604785-117609511 (-)
PWK/PhJ MGP_PWKPhJ_G0018430
 protein coding gene Chr11:114247532-114252437 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018222
 protein coding gene Chr11:117407695-117424809 (-)
WSB/EiJ MGP_WSBEiJ_G0018717
 protein coding gene Chr11:117562157-117566897 (-)



Homology
more
  • Human Ortholog
    BTBD17, BTB domain containing 17
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    BTBD17, BTB domain containing 17
  • Synonyms
    BTBD17A, LGALS3BPL, TANGO10A
  • Links
    NCBI Gene ID: 388419
    neXtProt AC: NX_A6NE02
    UniProt: A6NE02

  • Chr Location
    17q25.1; chr17:74356416-74363327 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotypes from 1 allele in 1 genetic background
    4 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    789
  • Tissues
    56
  • cDNA Data
    18
  • Literature Summary
    3
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000000202 Ensembl Gene Model | MGI Sequence Detail 4729 C57BL/6J ±  kb
    transcript ENSMUST00000000206 Ensembl | MGI Sequence Detail 1717 Not Applicable  
    polypeptide ENSMUSP00000000206 Ensembl | MGI Sequence Detail 478 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 20
      cDNA 19
      Other 1

      Microarray probesets 7
    References
    more
    • Summaries
      All 27
      Developmental Gene Expression 3
      Gene Ontology 1
      Phenotypes 4
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:313619 Bedogni F, et al., Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. Front Mol Neurosci. 2021;14:686034
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/16/2024
    MGI 6.23     		The Jackson Laboratory