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Dync2li1 Gene Detail
Summary
  • Symbol
    Dync2li1
  • Name
    dynein cytoplasmic 2 light intermediate chain 1
  • Synonyms
    4933404O11Rik, CGI-60, D2lic, LIC3, mD2LIC, MGC:40646, MGC:7211
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913996
    NCBI Gene: 213575
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:84933924-84963016 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 55.02 cM, cytoband E4
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    197 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913996
 protein coding gene Chr17:84933903-84963016 (+)
129S1/SvImJ MGP_129S1SvImJ_G0024080
 protein coding gene Chr17:87800227-87833188 (+)
A/J MGP_AJ_G0024039
 protein coding gene Chr17:85014486-85044308 (+)
AKR/J MGP_AKRJ_G0024008
 protein coding gene Chr17:86405630-86434509 (+)
BALB/cJ MGP_BALBcJ_G0024040
 protein coding gene Chr17:84864917-84895280 (+)
C3H/HeJ MGP_C3HHeJ_G0023805
 protein coding gene Chr17:87248139-87280400 (+)
C57BL/6NJ MGP_C57BL6NJ_G0024485
 protein coding gene Chr17:90910493-90948755 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0021924
 protein coding gene Chr17:80220778-80249908 (+)
CAST/EiJ MGP_CASTEiJ_G0023284
 protein coding gene Chr17:88040166-88071180 (+)
CBA/J MGP_CBAJ_G0023779
 protein coding gene Chr17:94670078-94699110 (+)
DBA/2J MGP_DBA2J_G0023907
 protein coding gene Chr17:83495769-83524795 (+)
FVB/NJ MGP_FVBNJ_G0023873
 protein coding gene Chr17:82977620-83007550 (+)
LP/J MGP_LPJ_G0023991
 protein coding gene Chr17:88560736-88595437 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0023901
 protein coding gene Chr17:94745656-94780696 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0024530
 protein coding gene Chr17:86884955-86920065 (+)
PWK/PhJ MGP_PWKPhJ_G0023029
 protein coding gene Chr17:83061352-83097646 (+)
SPRET/EiJ MGP_SPRETEiJ_G0022840
 protein coding gene Chr17:83700503-83732610 (+)
WSB/EiJ MGP_WSBEiJ_G0023350
 protein coding gene Chr17:87761988-87791660 (+)



Homology
more
  • Human Ortholog
    DYNC2LI1, dynein cytoplasmic 2 light intermediate chain 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    DYNC2LI1, dynein cytoplasmic 2 light intermediate chain 1
  • Synonyms
    CGI-60, D2LIC, LIC3
  • Links
    NCBI Gene ID: 51626
    neXtProt AC: NX_Q8TCX1
    UniProt: Q8TCX1

  • Chr Location
    2p21; chr2:43774039-43828347 (+)  GRCh38
Human Diseases
more
  • Diseases
    1 with human DYNC2LI1 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    20 phenotypes from 1 allele in 1 genetic background
    4 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for disruptions in this allele die before embryonic day 11.5. They display neural tube defects in addition to a variety developmental patterning abnormalities.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    31
  • GO References
    8
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    717
  • Tissues
    9
  • cDNA Data
    31
  • Literature Summary
    7
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000024253 Ensembl Gene Model | MGI Sequence Detail 29093 C57BL/6J ±  kb
    transcript ENSMUST00000025101 Ensembl | MGI Sequence Detail 1354 Not Applicable  
    polypeptide ENSMUSP00000025101 Ensembl | MGI Sequence Detail 351 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      1 Sequence
    • Protein Ontology
      PR:000006776 cytoplasmic dynein 2 light intermediate chain 1
      (term hierarchy)
    • InterPro Domains
      IPR040045 Cytoplasmic dynein 2 light intermediate chain 1
      IPR022780 Dynein family light intermediate chain
      IPR027417 P-loop containing nucleoside triphosphate hydrolase
    Molecular
    Reagents
    less
    • All nucleic 33
      cDNA 31
      Primer pair 2

      Microarray probesets 3
    References
    more
    • Summaries
      All 40
      Developmental Gene Expression 7
      Gene Ontology 8
      Phenotypes 4
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:306217 Lee H, et al., Cell cycle-related kinase is a crucial regulator for ciliogenesis and Hedgehog signaling in embryonic mouse lung development. BMB Rep. 2020 Jul;53(7):367-372
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/16/2024
    MGI 6.23     		The Jackson Laboratory