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Vwa5b2 Gene Detail
Summary
  • Symbol
    Vwa5b2
  • Name
    von Willebrand factor A domain containing 5B2
  • Synonyms
    EG328644, MGC:62438
  • Feature Type
    protein coding gene
  • IDs
    MGI:2681859
    NCBI Gene: 328643
  • Alliance
    genome feature page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:20408221-20424127 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 12.47 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    398 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2681859
 protein coding gene Chr16:20408174-20424128 (+)
129S1/SvImJ ENSMUSG00200045036
 protein coding gene Chr16:17405700-17421613 (+)
A/J ENSMUSG00195029280
 protein coding gene Chr16:16963272-16979202 (+)
AKR/J ENSMUSG00220036470
 protein coding gene Chr16:17280919-17296832 (+)
BALB/cJ ENSMUSG00180032519
 protein coding gene Chr16:17204494-17220406 (+)
C3H/HeJ ENSMUSG00175044309
 protein coding gene Chr16:17349557-17365463 (+)
C57BL/6NJ ENSMUSG00215035360
 protein coding gene Chr16:17070506-17086422 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020580
 protein coding gene Chr16:17749469-17765460 (+)
CAST/EiJ ENSTCUG00005041713
 protein coding gene Chr16:17678348-17694295 (+)
CBA/J ENSMUSG00210043035
 protein coding gene Chr16:17371320-17387223 (+)
DBA/2J ENSMUSG00185027634
 protein coding gene Chr16:17310075-17325979 (+)
FVB/NJ ENSMUSG00205028465
 protein coding gene Chr16:17312815-17328729 (+)
JF1/MsJ ENSUMUG00000025472
 protein coding gene Chr16:17502203-17518149 (+)
LP/J ENSMUSG00230039624
 protein coding gene Chr16:19889328-19905232 (+)
NOD/ShiLtJ ENSMUSG00190044275
 protein coding gene Chr16:17451597-17467504 (+)
NZO/HlLtJ ENSMUSG00225036826
 protein coding gene Chr16:23135127-23151034 (+)
PWK/PhJ ENSLUMG00010046889
 protein coding gene Chr16:17329338-17345236 (+)
SPRET/EiJ ENSMSPG00010045445
 protein coding gene Chr16:17188914-17206287 (+)
WSB/EiJ ENSIUOG00005032535
 protein coding gene Chr16:17545145-17561084 (+)



Homology
more
  • Human Ortholog
    VWA5B2, von Willebrand factor A domain containing 5B2
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    VWA5B2, von Willebrand factor A domain containing 5B2
  • Links
    NCBI Gene ID: 90113
    UniProt: Q8N398

  • Chr Location
    3q27.1; chr3:184228996-184242342 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    704
  • Tissues
    18
  • cDNA Data
    12
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000046613 Ensembl Gene Model | MGI Sequence Detail 15907 C57BL/6J ±  kb
transcript ENSMUST00000159780 Ensembl | MGI Sequence Detail 4042 Not Applicable  
polypeptide ENSMUSP00000123727 Ensembl | MGI Sequence Detail 1248 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    6 Sequences
  • InterPro Domains
    IPR013694 VIT domain
    IPR052627 von Willebrand factor A domain-containing protein 5B
    IPR036465 von Willebrand factor A-like domain superfamily
    IPR002035 von Willebrand factor, type A
  • GlyGen
    Q3UR50 1 site
Molecular
Reagents
less
  • All nucleic 13
    cDNA 13

    Microarray probesets 4
Other
Accession IDs
less
MGI:2146690, MGI:3646631
References
more
  • Summaries
    All 29
    Developmental Gene Expression 2
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:385560 Shao X, et al., MatrisomeDB 2.0: 2023 updates to the ECM-protein knowledge database. Nucleic Acids Res. 2023 Jan 6;51(D1):D1519-D1530
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory