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1200007C13Rik Gene Detail
Summary
  • Symbol
    1200007C13Rik
  • Name
    RIKEN cDNA 1200007C13 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1921369
    NCBI Gene: 74119
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:167669613-167675566 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 87.82 cM, cytoband H3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    47 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921369
 lncRNA gene Chr2:167669613-167675566 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006079
 lincRNA gene Chr2:173605177-173612682 (-)
A/J MGP_AJ_G0006070
 lincRNA gene Chr2:166449180-166456049 (-)
AKR/J MGP_AKRJ_G0006046
 lincRNA gene Chr2:171410566-171417469 (-)
BALB/cJ MGP_BALBcJ_G0006046
 lincRNA gene Chr2:166800390-166806845 (-)
C3H/HeJ MGP_C3HHeJ_G0005996
 lincRNA gene Chr2:171781733-171788571 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006208
 lincRNA gene Chr2:178664392-178670147 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005532
 lincRNA gene Chr2:159752236-159758111 (-)
CAST/EiJ MGP_CASTEiJ_G0005933
 lincRNA gene Chr2:172252981-172261187 (-)
CBA/J MGP_CBAJ_G0005981
 lincRNA gene Chr2:185238088-185247375 (-)
DBA/2J MGP_DBA2J_G0006001
 lincRNA gene Chr2:165550961-165556698 (-)
FVB/NJ MGP_FVBNJ_G0006026
 lincRNA gene Chr2:164097150-164102820 (-)
LP/J MGP_LPJ_G0006083
 lincRNA gene Chr2:173621491-173628939 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006015
 lincRNA gene Chr2:188577146-188584252 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006210
 lincRNA gene Chr2:171340996-171348650 (-)
PWK/PhJ MGP_PWKPhJ_G0005879
 lincRNA gene Chr2:165231171-165237874 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005789
 lincRNA gene Chr2:170297616-170303189 (-)
WSB/EiJ MGP_WSBEiJ_G0005981
 lincRNA gene Chr2:172251671-172261444 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    21
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000087684 Ensembl Gene Model | MGI Sequence Detail 5954 C57BL/6J ±  kb
transcript ENSMUST00000143649 Ensembl | MGI Sequence Detail 2455 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 10
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/21/2024
MGI 6.23 		The Jackson Laboratory