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Prrc1 Gene Detail
Summary
  • Symbol
    Prrc1
  • Name
    proline-rich coiled-coil 1
  • Synonyms
    1190002C06Rik, 2310058D16Rik, 3110038B19Rik, 9430085A19Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916106
    NCBI Gene: 73137
  • Alliance
    genome feature page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:57487813-57526028 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, 31.92 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1509 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916106
 protein coding gene Chr18:57487805-57526028 (+)
129S1/SvImJ ENSMUSG00200033347
 protein coding gene Chr18:54582085-54620365 (+)
A/J ENSMUSG00195005046
 protein coding gene Chr18:54705132-54743320 (+)
AKR/J ENSMUSG00220015667
 protein coding gene Chr18:54697827-54736068 (+)
BALB/cJ ENSMUSG00180011285
 protein coding gene Chr18:55275980-55314237 (+)
C3H/HeJ ENSMUSG00175032461
 protein coding gene Chr18:54892132-54930418 (+)
C57BL/6NJ ENSMUSG00215037931
 protein coding gene Chr18:54216415-54254633 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0022292
 protein coding gene Chr18:54129569-54169705 (+)
CAST/EiJ ENSTCUG00005024852
 protein coding gene Chr18:54092788-54131633 (+)
CBA/J ENSMUSG00210028596
 protein coding gene Chr18:54841058-54879248 (+)
DBA/2J ENSMUSG00185015186
 protein coding gene Chr18:54744291-54782568 (+)
FVB/NJ ENSMUSG00205014703
 protein coding gene Chr18:54208469-54246457 (+)
JF1/MsJ ENSUMUG00000019163
 protein coding gene Chr18:54641803-54680247 (+)
LP/J ENSMUSG00230010249
 protein coding gene Chr18:56755086-56793069 (+)
NOD/ShiLtJ ENSMUSG00190024516
 protein coding gene Chr18:54475546-54513539 (+)
NZO/HlLtJ ENSMUSG00225034151
 protein coding gene Chr18:56618787-56657063 (+)
PWK/PhJ ENSLUMG00010008257
 protein coding gene Chr18:54772955-54811614 (+)
SPRET/EiJ ENSMSPG00010016420
 protein coding gene Chr18:55159723-55194818 (+)
WSB/EiJ ENSIUOG00005008173
 protein coding gene Chr18:54379822-54418030 (+)



Homology
more
  • Human Ortholog
    PRRC1, proline rich coiled-coil 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PRRC1, proline rich coiled-coil 1
  • Links
    NCBI Gene ID: 133619
    UniProt: Q96M27

  • Chr Location
    5q23.2; chr5:127517617-127555085 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    9
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    636
  • Tissues
    3
  • cDNA Data
    99
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000024594 Ensembl Gene Model | MGI Sequence Detail 38216 C57BL/6J ±  kb
transcript ENSMUST00000025490 Ensembl | MGI Sequence Detail 5030 Not Applicable  
polypeptide ENSMUSP00000025490 Ensembl | MGI Sequence Detail 443 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 101
    cDNA 101

    Microarray probesets 7
Other
Accession IDs
less
MGI:1916908, MGI:1920387, MGI:1924623
References
more
  • Summaries
    All 37
    Developmental Gene Expression 1
    Gene Ontology 5
    Phenotypes 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:327181 Lewis MA, et al., Identification and characterisation of spontaneous mutations causing deafness from a targeted knockout programme. BMC Biol. 2022 Mar 17;20(1):67
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory