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Zfp39 Gene Detail
Summary
  • Symbol
    Zfp39
  • Name
    zinc finger protein 39
  • Synonyms
    CTfin33, Zfp-39
  • Feature Type
    protein coding gene
  • IDs
    MGI:99183
    NCBI Gene: 22698
  • Alliance
    genome feature page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:58778979-58795051 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 36.35 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    599 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_99183
 protein coding gene Chr11:58778979-58795051 (-)
129S1/SvImJ ENSMUSG00200036215
 protein coding gene Chr11:55785663-55801911 (-)
A/J ENSMUSG00195037418
 protein coding gene Chr11:55703937-55720387 (-)
AKR/J ENSMUSG00220046683
 protein coding gene Chr11:55881885-55898134 (-)
BALB/cJ ENSMUSG00180046238
 protein coding gene Chr11:55801905-55818146 (-)
C3H/HeJ ENSMUSG00175044137
 protein coding gene Chr11:55739168-55755609 (-)
C57BL/6NJ ENSMUSG00215018341
 protein coding gene Chr11:55569820-55585896 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016417
 protein coding gene Chr11:53704207-53721235 (-)
CAST/EiJ ENSTCUG00005037909
 protein coding gene Chr11:55295291-55311362 (-)
CBA/J ENSMUSG00210030437
 protein coding gene Chr11:55590526-55606970 (-)
DBA/2J ENSMUSG00185039842
 protein coding gene Chr11:55775481-55791929 (-)
FVB/NJ ENSMUSG00205027185
 protein coding gene Chr11:55644167-55660617 (-)
JF1/MsJ ENSUMUG00000014239
 protein coding gene Chr11:56132805-56148877 (-)
LP/J ENSMUSG00230044629
 protein coding gene Chr11:56982678-56998922 (-)
NOD/ShiLtJ ENSMUSG00190051029
 protein coding gene Chr11:55844576-55860945 (-)
NZO/HlLtJ ENSMUSG00225032058
 protein coding gene Chr11:58997096-59013342 (-)
PWK/PhJ ENSLUMG00010026118
 protein coding gene Chr11:55600874-55616846 (-)
SPRET/EiJ ENSMSPG00010033031
 protein coding gene Chr11:56365340-56386065 (-)
WSB/EiJ ENSIUOG00005029154
 protein coding gene Chr11:55642738-55658985 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotypes from 1 allele in 1 genetic background
    12 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    9
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    627
  • Tissues
    30
  • cDNA Data
    18
  • Literature Summary
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 22698 NCBI Gene Model | MGI Sequence Detail 16073 C57BL/6J ±  kb
transcript NM_011758 RefSeq | MGI Sequence Detail 3890 C57BL/6  
polypeptide Q02525 UniProt | EBI | MGI Sequence Detail 718 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 18
    cDNA 18

    Microarray probesets 3
Other
Accession IDs
less
MGD-MRK-15880, MGD-MRK-15935
References
more
  • Summaries
    All 39
    Developmental Gene Expression 4
    Gene Ontology 4
    Phenotypes 12
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory