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Trgv3 Gene Detail
Summary
  • Symbol
    Trgv3
  • Name
    T cell receptor gamma, variable 3
  • Synonyms
    vgamma3
  • Feature Type
    gene segment
  • IDs
    MGI:98633
    NCBI Gene: 21637
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr13:19427015-19427471 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 6.89 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    56 from dbSNP Build 142
  • Strain Annotations
    11
  • RFLP
    4
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_98633
 gene segment Chr13:19427015-19427471 (+)
129S1/SvImJ MGP_129S1SvImJ_G0002514
 gene segment Chr13:16375915-16376371 (+)
A/J MGP_AJ_G0002488
 gene segment Chr13:16251351-16253688 (-)
AKR/J MGP_AKRJ_G0002473
 gene segment Chr13:16346885-16348532 (+)
BALB/cJ MGP_BALBcJ_G0002483
 gene segment Chr13:16261362-16266023 (-)
C3H/HeJ MGP_C3HHeJ_G0002460
 gene segment Chr13:16490370-16490673 (+)
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0002208
 gene segment Chr13:14618579-14619035 (+)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0002451
 gene segment Chr13:17629725-17630031 (+)
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0002470
 gene segment Chr13:15412412-15412868 (+)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0002441
 gene segment Chr13:18160889-18161342 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0002603
 gene segment Chr13:16149764-16150220 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    TRGV10, T cell receptor gamma variable 10 (non-functional)
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TRGV10, T cell receptor gamma variable 10 (non-functional)
  • Synonyms
    TCRGV10, V3P
  • Links
    NCBI Gene ID: 6984
    UniProt: A0A0A0MS01

  • Chr Location
    7p14.1; chr7:38299810-38300322 (-)  GRCh38
  • Human Ortholog
    TRGV11, T cell receptor gamma variable 11 (non-functional)
  • Synonyms
    TCRGV11, V4P
  • Links
    NCBI Gene ID: 6985
    UniProt: A0A075B6L2

  • Chr Location
    7p14.1; chr7:38291616-38292078 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    19
  • RefSeq
    1
  • UniProt
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 21637 NCBI Gene Model | MGI Sequence Detail 457 C57BL/6J ±  kb
transcript Z49051 GenBank | ENA | DDBJ | MGI Sequence Detail 296 ABL  
polypeptide A0A0G2JEW2 UniProt | EBI | MGI Sequence Detail 117 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR013106 Immunoglobulin V-set domain
Molecular
Reagents
less
  • All nucleic 14
    Genomic 7
    cDNA 5
    Other 2
Other
Accession IDs
less
MGD-MRK-14925
References
more
  • Summaries
    All 23
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:7709 Hayday AC, et al., Structure, organization, and somatic rearrangement of T cell gamma genes. Cell. 1985 Feb;40(2):259-69
  • Latest
    J:174706 Taveirne S, et al., Langerhans cells are not required for epidermal Vgamma3 T cell homeostasis and function. J Leukoc Biol. 2011 Jul;90(1):61-8
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory