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Prh1 Gene Detail
Summary
  • Symbol
    Prh1
  • Name
    proline rich protein HaeIII subfamily 1
  • Synonyms
    A-type, MP2, Prp
  • Feature Type
    protein coding gene
  • IDs
    MGI:97773
    NCBI Gene: 19131
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
  • Candidate for QTL
    3 QTL
Location &
Maps
more
  • Sequence Map
    Chr6:132546805-132549364 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 64.03 cM, cytoband G1
  • Mapping Data
    64 experiments
Strain
Comparison
more
  • SNPs within 2kb
    74 from dbSNP Build 142
  • Strain Annotations
    11
  • PCR
    4
  • RFLP
    7
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_97773
 protein coding gene Chr6:132546772-132549904 (+)
129S1/SvImJ no annotation
A/J MGP_AJ_G0031356
 protein coding gene Chr6:131250988-131253536 (+)
AKR/J MGP_AKRJ_G0031283
 protein coding gene Chr6:135182104-135195289 (+)
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0031083
 protein coding gene Chr6:135295246-135296826 (+)
C57BL/6NJ MGP_C57BL6NJ_G0031821
 protein coding gene Chr6:140335568-140358393 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0031043
 protein coding gene Chr6:145686290-145686958 (+)
DBA/2J MGP_DBA2J_G0031201
 protein coding gene Chr6:130212410-130217238 (+)
FVB/NJ MGP_FVBNJ_G0031150
 protein coding gene Chr6:129086173-129114252 (+)
LP/J MGP_LPJ_G0031285
 protein coding gene Chr6:136850691-136867946 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0031856
 protein coding gene Chr6:135139393-135141744 (+)
PWK/PhJ MGP_PWKPhJ_G0030177
 protein coding gene Chr6:128590862-128612298 (+)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    PRB1, proline rich protein BstNI subfamily 1
  • Vertebrate Orthologs
    5
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PRB1, proline rich protein BstNI subfamily 1
  • Synonyms
    PM, PMF, PMS, PRB1L, PRB1M
  • Links
    NCBI Gene ID: 5542
    neXtProt AC: NX_P04280
    UniProt: P04280

  • Chr Location
    12p13.2; chr12:11351821-11355591 (-)  GRCh38
  • Human Ortholog
    PRB2, proline rich protein BstNI subfamily 2
  • Synonyms
    cP7, IB-9, PRPPRB1, Ps
  • Links
    NCBI Gene ID: 653247
    neXtProt AC: NX_P02812
    UniProt: P02812

  • Chr Location
    12p13.2; chr12:11391540-11501041 (-)  GRCh38
  • Human Ortholog
    PRB3, proline rich protein BstNI subfamily 3
  • Synonyms
    G1, PRG
  • Links
    NCBI Gene ID: 5544
    UniProt: Q04118

  • Chr Location
    12p13.2; chr12:11265914-11269707 (-)  GRCh38
  • Human Ortholog
    PRB4, proline rich protein BstNI subfamily 4
  • Synonyms
    Po
  • Links
    NCBI Gene ID: 5545
    UniProt: P10163

  • Chr Location
    12p13.2; chr12:11307077-11310436 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 19131 NCBI Gene Model | MGI Sequence Detail 2560 C57BL/6J ±  kb
transcript NM_011174 RefSeq | MGI Sequence Detail 870 ZRU/MplStud  
polypeptide P05142 UniProt | EBI | MGI Sequence Detail 261 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 30
    Genomic 24
    cDNA 4
    Primer pair 1
    Other 1

    Microarray probesets 1
Other
Accession IDs
less
MGD-MRK-13627
References
more
  • Summaries
    All 61
    Gene Ontology 1
  • Earliest
    J:7666 Azen EA, et al., Salivary proline-rich protein genes on chromosome 8 of mouse. Science. 1984 Nov 23;226(4677):967-9
  • Latest
    J:103246 Lopez-Solis RO, et al., Codominant expression of genes coding for different sets of inducible salivary polypeptides associated with parotid hypertrophy in two inbred mouse strains. J Cell Biochem. 2005 May 1;95(1):99-107
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory