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Gene Expression Data
Assay Details
Assay
Reference: J:185804 Larkins CE, et al., Defective Nodal and Cerl2 expression in the Arl13b(hnn) mutant node underlie its heterotaxia. Dev Biol. 2012 Jul 1;367(1):15-24
Assay type: RNA in situ
MGI Accession ID: MGI:7331345
Gene symbol: Nodal
Gene name: nodal growth differentiation factor
Probe: Nodal cDNA8
Probe preparation: Antisense RNA
Results
Specimen 2A: embryonic day 8.0 (more )
Note: 2-3 somites stage
Structure Level Pattern Image Note
TS12: node Present 2A Left-sided asymmetry was seen in 49 out of 69 embryos (summarized in 5A).
TS12: lateral plate mesoderm Present Regionally restricted 2A Expressed in the left side (85 out of 104 embryos).

Specimen 2B: embryonic day 8.0 (more )
Note: 4-5 somites stage
Structure Level Pattern Image Note
TS12: node Present 2B Left-sided asymmetry was seen in 29 out of 39 embryos (summarized in 5A).
TS12: lateral plate mesoderm Present Regionally restricted 2B Expressed in the left side (67 out of 82 embryos).

Specimen 2C: embryonic day 8.25 (more )
Note: 6-7 somites stage
Structure Level Pattern Image Note
TS12: node Present 2C
TS12: lateral plate mesoderm Absent 2C Expression in the left side was extinguished at the 6-7 somite stage (19 out of 28 embryos with no lateral plate mesoderm, summarized in 2D).

Specimen 2E: embryonic day 8.0; Arl13bhnn/Arl13bhnn (more )
Note: 2-3 somites stage
Structure Level Pattern Image Note
TS12: node Present 2E Symmetric expression (14 out of 26 embryos, summarized in 5B).
TS12: lateral plate mesoderm Absent 2E 26 out of 30 embryos.

Specimen 2F: embryonic day 8.0; Arl13bhnn/Arl13bhnn (more )
Note: 4-5 somites stage
Structure Level Pattern Image Note
TS12: node Present 2F Symmetric expression (11 out of 19 embryos, summarized in 5B).
TS12: lateral plate mesoderm Present Regionally restricted 2F Expressed in the right side (2 out of 31 embryos).

Specimen 2G: embryonic day 8.25; Arl13bhnn/Arl13bhnn (more )
Note: 6-7 somites stage
Structure Level Pattern Image Note
TS12: lateral plate mesoderm Present 2G Bilateral expression (9 out of 17 embryos).

Specimen 2I: embryonic day 8.0; Ift172wim/Ift172wim (more )
Note: 2-3 somites stage
Structure Level Pattern Image Note
TS12: node Present 2I Symmetric expression (4 out of 11 embryos, summarized in 5C).
TS12: lateral plate mesoderm Present 2I Bilateral expression (15 out of 20 embryos).

Specimen 2J: embryonic day 8.0; Ift172wim/Ift172wim (more )
Note: 4-5 somites stage
Structure Level Pattern Image Note
TS12: node Present 2J Symmetric expression (6 out of 8 embryos, summarized in 5C).
TS12: lateral plate mesoderm Present 2J Bilateral expression (13 out of 16 embryos).

Specimen 2K: embryonic day 8.0; Ift172wim/Ift172wim (more )
Note: 6-7 somites stage
Structure Level Pattern Image Note
TS12: lateral plate mesoderm Present 2K Bilateral expression (1 out of 2 embryos).

Specimen 2M: embryonic day 8.0; Arl13bhnn/Arl13bhnn, Ift172wim/Ift172wim (more )
Note: 2-3 somites stage
Structure Level Pattern Image Note
TS12: node Present 2M
TS12: lateral plate mesoderm Present 2M Bilateral expression (2 out of 4 embryos).

Specimen 2N: embryonic day 8.0; Arl13bhnn/Arl13bhnn, Ift172wim/Ift172wim (more )
Note: 4-5 somites stage
Structure Level Pattern Image Note
TS12: node Present 2N
TS12: lateral plate mesoderm Present 2N Bilateral expression (2 out of 3 embryos).

Specimen 2O: embryonic day 8.25; Arl13bhnn/Arl13bhnn, Ift172wim/Ift172wim (more )
Note: 6-7 somites stage
Structure Level Pattern Image Note
TS12: lateral plate mesoderm Present 2O Bilateral expression (1 out of 2 embryos).

Specimen 5A: embryonic day 7.5 (more )
Note: presomite stage
Structure Level Pattern Image Note
TS11: node Present 5A Left-sided asymmetry was seen in 20 out of 45 embryos.
TS11: lateral plate mesoderm Present Regionally restricted 5A Expressed in the left side.

Specimen 5B: embryonic day 7.5; Arl13bhnn/Arl13bhnn (more )
Note: presomite stage
Structure Level Pattern Image Note
TS11: node Present 5B Symmetric expression (14 out of 31 embryos).
TS11: lateral plate mesoderm Absent 5B

Specimen 5C: embryonic day 7.5; Ift172wim/Ift172wim (more )
Note: presomite stage
Structure Level Pattern Image Note
TS11: node Present 5C Right-sided asymmetry was seen (5 out of 16 embryos).
TS11: lateral plate mesoderm Present 5C Bilateral expression, with more expression on the left side.

Specimen 7C: embryonic day 8.25; Nodaltm1Rob/Nodal+ (more )
Note: 6-7 somites stage
Structure Level Pattern Image Note
TS12: node Present 7C
TS12: lateral plate mesoderm Present 7C Expression in the left side.

Specimen 7F: embryonic day 8.25; Arl13bhnn/Arl13bhnn, Nodaltm1Rob/Nodal+ (more )
Note: 6-7 somites stage
Structure Level Pattern Image Note
TS12: lateral plate mesoderm Absent 7F
TS12: node Trace 7F Expression was weakened such that any asymmetry could not be recorded.

Specimen not shown: embryonic day 7.5 (more )
Note: presomite stage
Structure Level Pattern Image Note
TS11: node Present 19 out of 45 embryos with symmetric expression; 6 with right-sided asymmetry (summarized in 5A).

Specimen not shown: embryonic day 8.0 (more )
Note: 2-3 somites stage
Structure Level Pattern Image Note
TS12: lateral plate mesoderm Absent 19 out of 104 embryos with no lateral plate mesoderm, summarized in 2D.
TS12: node Present 15 out of 69 embryos with symmetric expression; 5 with right-sided asymmetry; 49 with left-sided asymmetry (summarized in 5A).

Specimen not shown: embryonic day 8.0 (more )
Note: 4-5 somites stage
Structure Level Pattern Image Note
TS12: lateral plate mesoderm Absent 15 out of 82 embryos with no lateral plate mesoderm, summarized in 2D.
TS12: node Present 9 out of 39 embryos with symmetric expression; 1 with right-sided asymmetry; 29 with left-sided asymmetry (summarized in 5A).

Specimen not shown: embryonic day 8.25 (more )
Note: 6-7 somites stage
Structure Level Pattern Image Note
TS12: lateral plate mesoderm Present Regionally restricted 9 out of 28 embryos with expression only on the left side, summarized in 2D.

Specimen not shown: embryonic day 7.5; Arl13bhnn/Arl13bhnn (more )
Note: presomite stage
Structure Level Pattern Image Note
TS11: node Present 13 out of 31 embryos with left-sided asymmetry; 4 with right-sided asymmetry (summarized in 5B).

Specimen not shown: embryonic day 8.0; Arl13bhnn/Arl13bhnn (more )
Note: 2-3 somites stage
Structure Level Pattern Image Note
TS12: lateral plate mesoderm Present Regionally restricted There were 2 out of 30 embryos showed expression only on the left side; 2 on the right side (summarized in 2H).
TS12: node Present 9 out of 26 embryos with left-sided asymmetry; 3 with right-sided asymmetry; 14 with symmetric expression (summarized in 5B).

Specimen not shown: embryonic day 8.0; Arl13bhnn/Arl13bhnn (more )
Note: 4-5 somites stage
Structure Level Pattern Image Note
TS12: lateral plate mesoderm Present There were 5 out of 31 embryos showed expression only on the left side; 2 on the right side; 7 on both sides (summarized in 2H).
TS12: node Present 5 out of 19 embryos with left-sided asymmetry; 3 with right-sided asymmetry; 11 with symmetric expression (summarized in 5B).

Specimen not shown: embryonic day 8.25; Arl13bhnn/Arl13bhnn (more )
Note: 6-7 somites stage
Structure Level Pattern Image Note
TS12: lateral plate mesoderm Present Regionally restricted There were 3 out of 17 embryos showed expression only on the left side; 3 on the right side (summarized in 2H).

Specimen not shown: embryonic day 8.25; Arl13bhnn/Arl13bhnn (more )
Note: 6-7 somites stage
Structure Level Pattern Image Note
TS12: lateral plate mesoderm Absent There were 2 out of 17 embryos showed no expression (summarized in 2H).

Specimen not shown: embryonic day 7.5; Ift172wim/Ift172wim (more )
Note: presomite stage
Structure Level Pattern Image Note
TS11: node Present 2 out of 16 embryos with left-sided asymmetry; 9 with symmetric expression (summarized in 5C).

Specimen not shown: embryonic day 8.0; Ift172wim/Ift172wim (more )
Note: 2-3 somites stage
Structure Level Pattern Image Note
TS12: lateral plate mesoderm Absent There were 3 out of 20 embryos showed no expression (summarized in 2L).
TS12: node Present 2 out of 11 embryos with left-sided asymmetry; 5 with right-sided asymmetry; 4 with symmetric expression (summarized in 5C).

Specimen not shown: embryonic day 8.0; Ift172wim/Ift172wim (more )
Note: 2-3 somites stage
Structure Level Pattern Image Note
TS12: lateral plate mesoderm Present Regionally restricted 2 out of 20 embryos expressed only on the right side (summarized in 2L).

Specimen not shown: embryonic day 8.0; Ift172wim/Ift172wim (more )
Note: 4-5 somites stage
Structure Level Pattern Image Note
TS12: lateral plate mesoderm Present Regionally restricted 2 out of 16 embryos expressed only on the left side (summarized in 2L).
TS12: node Present 2 out of 8 embryos with left-sided asymmetry; 6 with symmetric expression (summarized in 5C).

Specimen not shown: embryonic day 8.0; Ift172wim/Ift172wim (more )
Note: 4-5 somites stage
Structure Level Pattern Image Note
TS12: lateral plate mesoderm Absent 1 out of 16 embryos with no expression (summarized in 2L).

Specimen not shown: embryonic day 8.25; Ift172wim/Ift172wim (more )
Note: 6-7 somites stage
Structure Level Pattern Image Note
TS12: lateral plate mesoderm Absent 1 out of 16 embryos with no expression (summarized in 2L).

Specimen not shown: embryonic day 8.0; Arl13bhnn/Arl13bhnn, Ift172wim/Ift172wim (more )
Note: 2-3 somites stage
Structure Level Pattern Image Note
TS12: lateral plate mesoderm Present Regionally restricted 1 out of 4 embryos expressed only on the right side (summarized in 2P).

Specimen not shown: embryonic day 8.0; Arl13bhnn/Arl13bhnn, Ift172wim/Ift172wim (more )
Note: 2-3 somites stage
Structure Level Pattern Image Note
TS12: lateral plate mesoderm Absent 1 out of 4 embryos with no expression (summarized in 2P).

Specimen not shown: embryonic day 8.0; Arl13bhnn/Arl13bhnn, Ift172wim/Ift172wim (more )
Note: 4-5 somites stage
Structure Level Pattern Image Note
TS12: lateral plate mesoderm Present Regionally restricted 1 out of 3 embryos expressed only on the right side (summarized in 2P).

Specimen not shown: embryonic day 8.25; Arl13bhnn/Arl13bhnn, Ift172wim/Ift172wim (more )
Note: 6-7 somites stage
Structure Level Pattern Image Note
TS12: lateral plate mesoderm Absent 1 out of 2 embryos with no expression (summarized in 2P).


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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory