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Rn18s-rs5 Pseudogene Detail
Summary
  • Symbol
    Rn18s-rs5
  • Name
    18s RNA, related sequence 5
  • Synonyms
    Gm42418, Rnr17
Location &
Maps
more
  • Sequence Map
    Chr17:40157245-40159093 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 17, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    27 from dbSNP Build 142
  • Strain Annotations
    1
  • RFLP
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_107222
pseudogene Chr17:40157244-40159093 (+)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
  • cDNA Data
  • Other Mouse Links
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic 110183 NCBI Gene Model | MGI Sequence Detail 1849 C57BL/6J ±  kb
transcript AK145507 GenBank | ENA | DDBJ | MGI Sequence Detail 1822 C57BL/6J  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2
Other
Accession IDs
less
MGD-MRK-28167, MGD-MRK-35687, MGI:5649005
References
more
  • Summaries
    All 11
  • Earliest
    J:695 Oberbaumer I, Retroposons do jump: a B2 element recently integrated in an 18S rDNA gene. Nucleic Acids Res. 1992 Feb 25;20(4):671-7
  • Latest
    J:37421 Rowe LB, et al., Genetic mapping of 18S ribosomal RNA-related loci to mouse chromosomes 5, 6, 9, 12, 17, 18, 19, and X. Mamm Genome. 1996 Dec;7(12):886-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory