Gene Expression Data
Assay Details
Assay
|
Reference:
|
J:182719
Mikedis MM, et al., STELLA-positive subregions of the primitive streak contribute to posterior tissues of the mouse gastrula. Dev Biol. 2012 Mar 1;363(1):201-18
|
Assay type:
|
Immunohistochemistry
|
MGI Accession ID:
|
MGI:5619305
|
Gene symbol:
|
Dppa3
|
Gene name:
|
developmental pluripotency-associated 3
|
Antibody:
|
Anti-Stella/Dppa3 AF2566
|
Detection system:
|
Biotinylated secondary antibody/[Strept]avidin coupled to horseradish peroxidase
|
|
Results
|
Specimen
not shown:
embryonic day 6.75
(more )
Note: Early streak stage.
Specimen
not shown:
(close )
Genetic Background:
|
involves: C57BL/6J * CBA/J
|
Age:
|
embryonic day 6.75
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
Early streak stage.
|
Specimen
1A:
embryonic day 8.25
(more )
Note: 4 somite stage.
Specimen
1A:
(close )
Genetic Background:
|
involves: C57BL/6J * CBA/J
|
Age:
|
embryonic day 8.25
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
4 somite stage.
|
Structure |
Level |
Pattern |
Image |
Note |
TS12: allantois |
Present |
Regionally restricted |
1A
|
Expression was detected in the base of the allantois.
|
Specimen
1C:
embryonic day 12.5
(more )
Specimen
1C:
(close )
Genetic Background:
|
involves: C57BL/6J * CBA/J
|
Age:
|
embryonic day 12.5
|
Sex:
|
Female
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
1D:
embryonic day 12.5
(more )
Specimen
1D:
(close )
Genetic Background:
|
involves: C57BL/6J * CBA/J
|
Age:
|
embryonic day 12.5
|
Sex:
|
Male
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
1E:
embryonic day 7.0
(more )
Note: No allantoic bud.
Specimen
1E:
(close )
Genetic Background:
|
involves: C57BL/6J * CBA/J
|
Age:
|
embryonic day 7.0
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
No allantoic bud.
|
Structure |
Level |
Pattern |
Image |
Note |
TS10: extraembryonic component |
Present |
Regionally restricted |
1E
|
A cluster of cells was localized to the extraembryonic primitive streak.
|
Specimen
1F:
embryonic day 7.5
(more )
Note: Late bud stage.
Specimen
1F:
(close )
Genetic Background:
|
involves: C57BL/6J * CBA/J
|
Age:
|
embryonic day 7.5
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
Late bud stage.
|
Specimen
1G:
embryonic day 8.0
(more )
Note: Late headfold stage.
Specimen
1G:
(close )
Genetic Background:
|
involves: C57BL/6J * CBA/J
|
Age:
|
embryonic day 8.0
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
Late headfold stage.
|
Specimen
1H1:
embryonic day 8.25
(more )
Note: 2 somite stage.
Specimen
1H1:
(close )
Genetic Background:
|
involves: C57BL/6J * CBA/J
|
Age:
|
embryonic day 8.25
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
2 somite stage.
|
Specimen
1H2:
embryonic day 8.25
(more )
Note: 2 somite stage.
Specimen
1H2:
(close )
Genetic Background:
|
involves: C57BL/6J * CBA/J
|
Age:
|
embryonic day 8.25
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
2 somite stage.
|
Structure |
Level |
Pattern |
Image |
Note |
TS12: allantois |
Present |
Regionally restricted |
1H2
|
Expression was detected in the allantoic core domain. The cells formed a tight cluster within the midline.
|
TS12: extraembryonic visceral endoderm |
Present |
Regionally restricted |
1H2
|
Expression was detected in the allantois-associated extraembryonic visceral endoderm.
|
Specimen
1H3:
embryonic day 8.25
(more )
Note: 2 somite stage.
Specimen
1H3:
(close )
Genetic Background:
|
involves: C57BL/6J * CBA/J
|
Age:
|
embryonic day 8.25
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
2 somite stage.
|
Structure |
Level |
Pattern |
Image |
Note |
TS12: allantois |
Present |
Regionally restricted |
1H3
|
Expression was detected in the allantoic core domain. The cells formed a tight cluster within the midline.
|
TS12: extraembryonic visceral endoderm |
Present |
Regionally restricted |
1H3
|
Expression was detected in the allantois-associated extraembryonic visceral endoderm.
|
Specimen
1I:
embryonic day 8.25
(more )
Note: 3 somite stage.
Specimen
1I:
(close )
Genetic Background:
|
involves: C57BL/6J * CBA/J
|
Age:
|
embryonic day 8.25
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
3 somite stage.
|
Specimen
1J:
embryonic day 8.25
(more )
Note: 5 somite stage.
Specimen
1J:
(close )
Genetic Background:
|
involves: C57BL/6J * CBA/J
|
Age:
|
embryonic day 8.25
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
5 somite stage.
|
Specimen
2A1:
embryonic day 8.5
(more )
Note: 7 somite stage.
Specimen
2A1:
(close )
Genetic Background:
|
involves: C57BL/6J * CBA/J
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
7 somite stage.
|
Structure |
Level |
Pattern |
Image |
Note |
TS12: hindgut diverticulum endoderm |
Present |
Regionally restricted |
2A1
|
Expression was detected in the dorsal and ventral hindgut.
|
TS12: conceptus |
Present |
Regionally restricted |
2A1
|
Expression was detected at the site of amniotic insertion at the embryonic-extraembryonic junction.
|
TS12: surface ectoderm |
Present |
Regionally restricted |
2A1
|
A small population of positive cells persisted within the surface ectoderm near the allantoic-amniotic junction.
|
Specimen
2A2:
embryonic day 8.5
(more )
Note: 7 somite stage.
Specimen
2A2:
(close )
Genetic Background:
|
involves: C57BL/6J * CBA/J
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
7 somite stage.
|
Specimen
2A3:
embryonic day 8.5
(more )
Note: 7 somite stage.
Specimen
2A3:
(close )
Genetic Background:
|
involves: C57BL/6J * CBA/J
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
7 somite stage.
|
Specimen
2B:
embryonic day 8.75
(more )
Note: 8 somite stage.
Specimen
2B:
(close )
Genetic Background:
|
involves: C57BL/6J * CBA/J
|
Age:
|
embryonic day 8.75
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
8 somite stage.
|
Structure |
Level |
Pattern |
Image |
Note |
TS13: allantois |
Present |
Regionally restricted |
2B
|
Expression was detected in a cluster of cells in the midregion of the allantois.
|
TS13: hindgut diverticulum endoderm |
Present |
Regionally restricted |
2B
|
Expression was localized to the ventral endoderm, near the omphalomesenteric artery.
|
Specimen
2C1:
embryonic day 8.5
(more )
Note: 6 somite stage. The sequence of specimens C1-5 begins at the hindgut opening and proceeds posteriorly toward the allantois.
Specimen
2C1:
(close )
Genetic Background:
|
involves: C57BL/6J * CBA/J
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
6 somite stage. The sequence of specimens C1-5 begins at the hindgut opening and proceeds posteriorly toward the allantois.
|
Structure |
Level |
Pattern |
Image |
Note |
TS12: primitive endoderm |
Present |
Regionally restricted |
2C1
|
Expression was localized to the endoderm at the leading edge of the open hindgut. No positive cells were detected in the presumptive dorsal hindgut endoderm.
|
Specimen
2C2:
embryonic day 8.5
(more )
Note: 6 somite stage. The sequence of specimens C1-5 begins at the hindgut opening and proceeds posteriorly toward the allantois.
Specimen
2C2:
(close )
Genetic Background:
|
involves: C57BL/6J * CBA/J
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
6 somite stage. The sequence of specimens C1-5 begins at the hindgut opening and proceeds posteriorly toward the allantois.
|
Structure |
Level |
Pattern |
Image |
Note |
TS12: hindgut diverticulum endoderm |
Present |
Regionally restricted |
2C2
|
In the anterior-most segment of closed hindgut, positive cells were localized to the ventral, but not dorsal side.
|
Specimen
2C3:
embryonic day 8.5
(more )
Note: 6 somite stage. The sequence of specimens C1-5 begins at the hindgut opening and proceeds posteriorly toward the allantois.
Specimen
2C3:
(close )
Genetic Background:
|
involves: C57BL/6J * CBA/J
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
6 somite stage. The sequence of specimens C1-5 begins at the hindgut opening and proceeds posteriorly toward the allantois.
|
Structure |
Level |
Pattern |
Image |
Note |
TS12: hindgut diverticulum endoderm |
Present |
Regionally restricted |
2C3
|
Moving posteriorly along the hindgut tube, staining continued in the ventral hindgut, but some staining was also localized to the dorsal hindgut.
|
TS12: embryo mesenchyme |
Present |
Regionally restricted |
2C3
|
Expression was detected in the posterior mesenchyme.
|
TS12: surface ectoderm |
Present |
Regionally restricted |
2C3
|
Exression was detected in the posterior dorsal surface ectoderm.
|
Specimen
2C4:
embryonic day 8.5
(more )
Note: 6 somite stage. The sequence of specimens C1-5 begins at the hindgut opening and proceeds posteriorly toward the allantois.
Specimen
2C4:
(close )
Genetic Background:
|
involves: C57BL/6J * CBA/J
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
6 somite stage. The sequence of specimens C1-5 begins at the hindgut opening and proceeds posteriorly toward the allantois.
|
Specimen
2C5:
embryonic day 8.5
(more )
Note: 6 somite stage. The sequence of specimens C1-5 begins at the hindgut opening and proceeds posteriorly toward the allantois.
Specimen
2C5:
(close )
Genetic Background:
|
involves: C57BL/6J * CBA/J
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
6 somite stage. The sequence of specimens C1-5 begins at the hindgut opening and proceeds posteriorly toward the allantois.
|
Specimen
2D:
embryonic day 8.75
(more )
Note: 9 somite stage.
Specimen
2D:
(close )
Genetic Background:
|
involves: C57BL/6J * CBA/J
|
Age:
|
embryonic day 8.75
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
9 somite stage.
|
Specimen
not shown:
embryonic day 8.75
(more )
Note: 9 somite stage.
Specimen
not shown:
(close )
Genetic Background:
|
involves: C57BL/6J * CBA/J
|
Age:
|
embryonic day 8.75
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
9 somite stage.
|
Structure |
Level |
Pattern |
Image |
Note |
TS13: somatopleure |
Present |
|
|
Staining was occasionally seen in the mesoderm of the somatopleure.
|
Specimen
2E1:
embryonic day 9.0
(more )
Note: 11 somite stage. Transverse section taken at the level of the closed hindgut tube anterior to the allantoic insertion into the tailbud.
Specimen
2E1:
(close )
Genetic Background:
|
involves: C57BL/6J * CBA/J
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
11 somite stage. Transverse section taken at the level of the closed hindgut tube anterior to the allantoic insertion into the tailbud.
|
Specimen
2E2:
embryonic day 9.0
(more )
Note: 11 somite stage. Transverse section taken at the level of the closed hindgut tube posterior to the allantoic insertion into the tailbud.
Specimen
2E2:
(close )
Genetic Background:
|
involves: C57BL/6J * CBA/J
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
11 somite stage. Transverse section taken at the level of the closed hindgut tube posterior to the allantoic insertion into the tailbud.
|
Structure |
Level |
Pattern |
Image |
Note |
TS13: surface ectoderm |
Present |
Regionally restricted |
2E2
|
Expression was near the surface ectoderm of the tailbud.
|
Specimen
2E3:
embryonic day 9.0
(more )
Note: 11 somite stage. Transverse section taken at the level of the closed hindgut tube posterior to the allantoic insertion into the tailbud.
Specimen
2E3:
(close )
Genetic Background:
|
involves: C57BL/6J * CBA/J
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
11 somite stage. Transverse section taken at the level of the closed hindgut tube posterior to the allantoic insertion into the tailbud.
|
Structure |
Level |
Pattern |
Image |
Note |
TS13: embryo ectoderm |
Present |
Regionally restricted |
2E3
|
Expression was in the ventral ectoderm ridge of the posterior embryo.
|
TS13: allantois |
Present |
Regionally restricted |
2E3
|
Positive cells appeared sporadically either as a single cell or a small cluster of cells throughout the length of the allantois. This section shows positive cells on the mesothelial surface.
|
Specimen
not shown:
embryonic day 9.0
(more )
Specimen
not shown:
(close )
Genetic Background:
|
involves: C57BL/6J * CBA/J
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS13: allantois |
Present |
Regionally restricted |
|
Positive cells appeared sporadically either as a single cell or a small cluster of cells throughout the length of the allantois. Positive cells were within the core.
|
Specimen
3A:
embryonic day 8.75
(more )
Note: 8 somite stage.
Specimen
3A:
(close )
Genetic Background:
|
involves: C57BL/6J * CBA/J
|
Age:
|
embryonic day 8.75
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
8 somite stage.
|
Structure |
Level |
Pattern |
Image |
Note |
TS13: blood island |
Present |
Single cells |
3A
|
|
TS13: yolk sac endoderm |
Present |
Regionally restricted |
3A
|
Expression was localized within vesicles of the extraembryonic visceral endoderm of the visceral yolk sac.
|
Specimen
3B:
embryonic day 8.25
(more )
Note: 3 somite stage.
Specimen
3B:
(close )
Genetic Background:
|
involves: C57BL/6J * CBA/J
|
Age:
|
embryonic day 8.25
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
3 somite stage.
|
Specimen
3B upper right inset:
embryonic day 8.25
(more )
Note: 3 somite stage.
Specimen
3B upper right inset:
(close )
Genetic Background:
|
involves: C57BL/6J * CBA/J
|
Age:
|
embryonic day 8.25
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
3 somite stage.
|
|