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B3galt9 Gene Detail
Summary
  • Symbol
    B3galt9
  • Name
    beta-1,3-galactosyltransferase 9
  • Synonyms
    Gm34653
  • Feature Type
    protein coding gene
  • IDs
    MGI:5593812
    NCBI Gene: 102637973
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr2:34723019-34729740 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    70 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5593812
 protein coding gene Chr2:34716304-34729741 (+)
129S1/SvImJ MGP_129S1SvImJ_G0040216
 pseudogene Chr2:33452430-33453194 (+)
A/J MGP_AJ_G0040200
 pseudogene Chr2:32033464-32034228 (+)
AKR/J MGP_AKRJ_G0040134
 pseudogene Chr2:33160550-33161314 (+)
BALB/cJ MGP_BALBcJ_G0040201
 pseudogene Chr2:32138200-32138964 (+)
C3H/HeJ MGP_C3HHeJ_G0039840
 pseudogene Chr2:33053698-33054462 (+)
C57BL/6NJ MGP_C57BL6NJ_G0040789
 pseudogene Chr2:34416173-34416937 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0037229
 pseudogene Chr2:30722651-30723418 (+)
CAST/EiJ MGP_CASTEiJ_G0038926
 pseudogene Chr2:33046192-33046959 (+)
CBA/J MGP_CBAJ_G0039808
 pseudogene Chr2:35748383-35749147 (+)
DBA/2J MGP_DBA2J_G0040001
 pseudogene Chr2:31800060-31800824 (+)
FVB/NJ MGP_FVBNJ_G0039958
 pseudogene Chr2:31692594-31693358 (+)
LP/J MGP_LPJ_G0040046
 pseudogene Chr2:33367889-33368653 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0039954
 pseudogene Chr2:35264363-35265127 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0040887
 pseudogene Chr2:33046331-33047098 (+)
PWK/PhJ MGP_PWKPhJ_G0038617
 pseudogene Chr2:31714865-31715632 (+)
SPRET/EiJ MGP_SPRETEiJ_G0038314
 pseudogene Chr2:33205928-33206695 (+)
WSB/EiJ MGP_WSBEiJ_G0039143
 pseudogene Chr2:33225834-33226601 (+)



Homology
more
  • Human Ortholog
    B3GALT9, beta-1,3-galactosyltransferase 9
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    B3GALT9, beta-1,3-galactosyltransferase 9
  • Synonyms
    B3GNT10
  • Links
    NCBI Gene ID: 100288842
    UniProt: A8MXE2

  • Chr Location
    chr9:120792403-120801787 (+)  GRCh38
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    4
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000107167 Ensembl Gene Model | MGI Sequence Detail 6722 C57BL/6J ±  kb
transcript ENSMUST00000201786 Ensembl | MGI Sequence Detail 1658 Not Applicable  
polypeptide ENSMUSP00000149256 Ensembl | MGI Sequence Detail 368 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • EC
    2.4.1.-
  • InterPro Domains
    IPR002659 Glycosyl transferase, family 31
References
more
  • Summaries
    All 6
    Gene Ontology 1
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:161428 Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas, Annotation inferences using phylogenetic trees. 2010;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory